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    golga2 golgin A2 [ Takifugu rubripes (torafugu) ]

    Gene ID: 101077780, updated on 8-Mar-2024

    Summary

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    Gene symbol
    golga2
    Gene description
    golgin A2
    See related
    Ensembl:ENSTRUG00000018651
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Takifugu rubripes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
    Orthologs
    human zebrafish all
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    Genomic context

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    See golga2 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    28
    Annotation release Status Assembly Chr Location
    103 current fTakRub1.2 (GCF_901000725.2) 6 NC_042290.1 (9765489..9777151)
    101 previous assembly FUGU5 (GCF_000180615.1) 6 NC_018895.1 (7194802..7206415)

    Chromosome 6 - NC_042290.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORD58 Neighboring gene ribosomal protein L17 Neighboring gene multifunctional ROCO family signaling regulator 1 Neighboring gene dynamin 1a Neighboring gene uncharacterized LOC115250222 Neighboring gene uncharacterized LOC105416566 Neighboring gene microRNA mir-199-2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Golgi organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in Golgi cis cisterna IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in Golgi cisterna membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cis-Golgi network IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    golgin subfamily A member 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fTakRub1.2 Primary Assembly

    Genomic

    1. NC_042290.1 Reference fTakRub1.2 Primary Assembly

      Range
      9765489..9777151
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011604814.2 → XP_011603116.2  golgin subfamily A member 2 isoform X1

      UniProtKB/TrEMBL
      A0A674MX34, A0A674PR50
      Related
      ENSTRUP00000088096.1, ENSTRUT00000073327.1
      Conserved Domains (2) summary
      TIGR02168
      Location:168 → 508
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam15070
      Location:417 → 1094
      GOLGA2L5; Putative golgin subfamily A member 2-like protein 5

    2. XM_011604816.2 → XP_011603118.2  golgin subfamily A member 2 isoform X3

      UniProtKB/TrEMBL
      A0A674MX34, H2VEX8
      Related
      ENSTRUP00000047773.3, ENSTRUT00000047935.3
      Conserved Domains (2) summary
      COG1196
      Location:188 → 454
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam15070
      Location:390 → 1067
      GOLGA2L5; Putative golgin subfamily A member 2-like protein 5

    3. XM_029837970.1 → XP_029693830.1  golgin subfamily A member 2 isoform X4

      UniProtKB/TrEMBL
      A0A674MX34, A0A674PL29
      Related
      ENSTRUP00000086351.1, ENSTRUT00000070627.1
      Conserved Domains (2) summary
      TIGR02168
      Location:122 → 462
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam15070
      Location:371 → 1048
      GOLGA2L5; Putative golgin subfamily A member 2-like protein 5

    4. XM_011604815.2 → XP_011603117.2  golgin subfamily A member 2 isoform X2

      UniProtKB/TrEMBL
      A0A674MX34, H2VEX9
      Related
      ENSTRUP00000047774.3, ENSTRUT00000047936.3
      Conserved Domains (2) summary
      TIGR02168
      Location:145 → 485
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam15070
      Location:394 → 1071
      GOLGA2L5; Putative golgin subfamily A member 2-like protein 5

    5. XM_011604817.2 → XP_011603119.2  golgin subfamily A member 2 isoform X5

      UniProtKB/TrEMBL
      A0A674MX34, H2VEY1
      Related
      ENSTRUP00000047776.3, ENSTRUT00000047938.3
      Conserved Domains (2) summary
      TIGR02168
      Location:99 → 439
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam15070
      Location:348 → 1025
      GOLGA2L5; Putative golgin subfamily A member 2-like protein 5
    Nucleotide Protein
    Heading Accession and Version

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