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    PKHD1 polycystic kidney and hepatic disease 1 (autosomal recessive) [ Gallus gallus (chicken) ]

    Gene ID: 422044, updated on 17-Aug-2024

    Summary

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    Symbol
    PKHD1provided by CGNC
    Full Name
    polycystic kidney and hepatic disease 1 (autosomal recessive)provided by CGNC
    Primary source
    CGNC:12499
    See related
    Ensembl:ENSGALG00010007934
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    fibrocystin
    Orthologs
    human mouse all
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    Genomic context

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    See PKHD1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    72
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (107403950..107634779)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (107167780..107399856)

    Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene microRNA 133b Neighboring gene microRNA 206 Neighboring gene transfer RNA tryptophan (anticodon CCA) Neighboring gene uncharacterized LOC107053179 Neighboring gene uncharacterized LOC121110423 Neighboring gene uncharacterized LOC124417867 Neighboring gene transcription factor AP-2 beta

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    fibrocystin
    Names
    PKHD1, fibrocystin/polyductin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      107403950..107634779
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040697985.2 → XP_040553919.1  fibrocystin isoform X1

      UniProtKB/TrEMBL
      A0A8V0XUX1
      Conserved Domains (3) summary
      cd00603
      Location:1200 → 1296
      IPT_PCSR; IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the ...
      cl08459
      Location:358 → 443
      PA14; PA14 domain
      cl15674
      Location:1576 → 1645
      IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...

    2. XM_040697986.2 → XP_040553920.1  fibrocystin isoform X2

      UniProtKB/TrEMBL
      A0A8V0XUX1
      Related
      ENSGALP00010010483.1, ENSGALT00010018934.1
      Conserved Domains (3) summary
      cd00603
      Location:1200 → 1296
      IPT_PCSR; IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the ...
      cl08459
      Location:358 → 443
      PA14; PA14 domain
      cl15674
      Location:1576 → 1645
      IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...

    3. XM_040697987.2 → XP_040553921.1  fibrocystin isoform X4

      UniProtKB/TrEMBL
      A0A8V0XUX1
      Conserved Domains (3) summary
      cd00603
      Location:1200 → 1296
      IPT_PCSR; IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the ...
      cl08459
      Location:358 → 443
      PA14; PA14 domain
      cl15674
      Location:1576 → 1645
      IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...

    4. XM_025149209.3 → XP_025004977.2  fibrocystin isoform X3

      UniProtKB/TrEMBL
      A0A8V0XUX1
      Related
      ENSGALP00010010479.1, ENSGALT00010018930.1
      Conserved Domains (3) summary
      cd00603
      Location:1200 → 1296
      IPT_PCSR; IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the ...
      cl08459
      Location:358 → 443
      PA14; PA14 domain
      cl15674
      Location:1576 → 1645
      IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...

    5. XM_040697988.2 → XP_040553922.1  fibrocystin isoform X5

      UniProtKB/TrEMBL
      A0A8V0XUX1
      Conserved Domains (3) summary
      cd00603
      Location:1200 → 1296
      IPT_PCSR; IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the ...
      cl08459
      Location:358 → 443
      PA14; PA14 domain
      cl15674
      Location:1576 → 1645
      IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...

    6. XM_040697990.2 → XP_040553924.1  fibrocystin isoform X7

      UniProtKB/TrEMBL
      A0A8V0XUX1
      Conserved Domains (3) summary
      cd00603
      Location:1200 → 1296
      IPT_PCSR; IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the ...
      cl08459
      Location:358 → 443
      PA14; PA14 domain
      cl15674
      Location:1576 → 1645
      IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...

    7. XM_040697992.2 → XP_040553926.1  fibrocystin isoform X9

      UniProtKB/TrEMBL
      A0A8V0XUX1
      Conserved Domains (3) summary
      cd00603
      Location:1200 → 1296
      IPT_PCSR; IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the ...
      cl08459
      Location:358 → 443
      PA14; PA14 domain
      cl15674
      Location:1576 → 1645
      IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...

    8. XM_040697991.2 → XP_040553925.1  fibrocystin isoform X8

      UniProtKB/TrEMBL
      A0A8V0XUX1
      Conserved Domains (3) summary
      cd00603
      Location:1200 → 1296
      IPT_PCSR; IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the ...
      cl08459
      Location:358 → 443
      PA14; PA14 domain
      cl15674
      Location:1576 → 1645
      IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...

    9. XM_040697993.2 → XP_040553927.1  fibrocystin isoform X10

      UniProtKB/TrEMBL
      A0A8V0XUX1
      Conserved Domains (3) summary
      cd00603
      Location:1200 → 1296
      IPT_PCSR; IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the ...
      cl08459
      Location:358 → 443
      PA14; PA14 domain
      cl15674
      Location:1576 → 1645
      IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...

    10. XM_040697989.1 → XP_040553923.1  fibrocystin isoform X6

      UniProtKB/TrEMBL
      A0A8V0XUX1
      Conserved Domains (3) summary
      cd00603
      Location:1032 → 1128
      IPT_PCSR; IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the ...
      cl08459
      Location:190 → 275
      PA14; PA14 domain
      cl15674
      Location:1408 → 1477
      IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...

    RNA

    1. XR_005858607.2 RNA Sequence

    2. XR_005858605.2 RNA Sequence

    3. XR_005858606.2 RNA Sequence

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      107167780..107399856
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040668477.2 → XP_040524411.1  fibrocystin isoform X1

      UniProtKB/TrEMBL
      A0A8V0XUX1
      Conserved Domains (3) summary
      cd00603
      Location:1200 → 1296
      IPT_PCSR; IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the ...
      cl08459
      Location:358 → 443
      PA14; PA14 domain
      cl15674
      Location:1576 → 1645
      IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...

    2. XM_040668478.2 → XP_040524412.1  fibrocystin isoform X2

      UniProtKB/TrEMBL
      A0A8V0XUX1
      Conserved Domains (3) summary
      cd00603
      Location:1200 → 1296
      IPT_PCSR; IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the ...
      cl08459
      Location:358 → 443
      PA14; PA14 domain
      cl15674
      Location:1576 → 1645
      IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...

    3. XM_040668480.2 → XP_040524414.1  fibrocystin isoform X4

      UniProtKB/TrEMBL
      A0A8V0XUX1
      Conserved Domains (3) summary
      cd00603
      Location:1200 → 1296
      IPT_PCSR; IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the ...
      cl08459
      Location:358 → 443
      PA14; PA14 domain
      cl15674
      Location:1576 → 1645
      IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...

    4. XM_040668479.2 → XP_040524413.1  fibrocystin isoform X3

      UniProtKB/TrEMBL
      A0A8V0XUX1
      Conserved Domains (3) summary
      cd00603
      Location:1200 → 1296
      IPT_PCSR; IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the ...
      cl08459
      Location:358 → 443
      PA14; PA14 domain
      cl15674
      Location:1576 → 1645
      IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...

    5. XM_040668481.2 → XP_040524415.1  fibrocystin isoform X5

      UniProtKB/TrEMBL
      A0A8V0XUX1
      Conserved Domains (3) summary
      cd00603
      Location:1200 → 1296
      IPT_PCSR; IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the ...
      cl08459
      Location:358 → 443
      PA14; PA14 domain
      cl15674
      Location:1576 → 1645
      IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...

    6. XM_040668483.2 → XP_040524417.1  fibrocystin isoform X7

      UniProtKB/TrEMBL
      A0A8V0XUX1
      Conserved Domains (3) summary
      cd00603
      Location:1200 → 1296
      IPT_PCSR; IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the ...
      cl08459
      Location:358 → 443
      PA14; PA14 domain
      cl15674
      Location:1576 → 1645
      IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...

    7. XM_040668485.2 → XP_040524419.1  fibrocystin isoform X9

      UniProtKB/TrEMBL
      A0A8V0XUX1
      Conserved Domains (3) summary
      cd00603
      Location:1200 → 1296
      IPT_PCSR; IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the ...
      cl08459
      Location:358 → 443
      PA14; PA14 domain
      cl15674
      Location:1576 → 1645
      IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...

    8. XM_040668484.2 → XP_040524418.1  fibrocystin isoform X8

      UniProtKB/TrEMBL
      A0A8V0XUX1
      Conserved Domains (3) summary
      cd00603
      Location:1200 → 1296
      IPT_PCSR; IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the ...
      cl08459
      Location:358 → 443
      PA14; PA14 domain
      cl15674
      Location:1576 → 1645
      IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...

    9. XM_040668486.2 → XP_040524420.1  fibrocystin isoform X10

      UniProtKB/TrEMBL
      A0A8V0XUX1
      Conserved Domains (3) summary
      cd00603
      Location:1200 → 1296
      IPT_PCSR; IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the ...
      cl08459
      Location:358 → 443
      PA14; PA14 domain
      cl15674
      Location:1576 → 1645
      IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...

    10. XM_040668482.1 → XP_040524416.1  fibrocystin isoform X6

      UniProtKB/TrEMBL
      A0A8V0XUX1
      Conserved Domains (3) summary
      cd00603
      Location:1032 → 1128
      IPT_PCSR; IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the ...
      cl08459
      Location:190 → 275
      PA14; PA14 domain
      cl15674
      Location:1408 → 1477
      IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...

    RNA

    1. XR_005848676.2 RNA Sequence

    2. XR_005848674.2 RNA Sequence

    3. XR_005848675.2 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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