Name: rs201942185
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs201942185

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr1:1433011-1433057 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: del(GCCGCTGCCCCTCACC)₂ / delGCCGCT…
del(GCCGCTGCCCCTCACC)₂ / delGCCGCTG(C)₄TCACC / dupGCCGCTG(C)₄TCACC / dup(GCCGCTGCCCCTCACC)₂ / ins(GCCGCTGCCCCTCACC)₃ / ins(GCCGCTGCCCCTCACC)₄ / ins(GCCGCTGCCCCTCACC)₅
Variation Type: Indel Insertion and Deletion
Frequency: delGCCGCTG(C)₄TCACC=0.00639 (95/14878, ALFA)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: LINC01770 : Intron Variant
LOC107985729 : 2KB Upstream Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	HTRZ	HWEP
Total	Global	14878	CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC=0.99335	CCGCTGCCCCTCACC=0.00000, CCGCTGCCCCTCACCGCCGCTGCCCCTCACC=0.00639, CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC=0.00007, CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC=0.00020	0.987223	0.012777	0
European	Sub	11840	CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC=0.99164	CCGCTGCCCCTCACC=0.00000, CCGCTGCCCCTCACCGCCGCTGCCCCTCACC=0.00802, CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC=0.00008, CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC=0.00025	0.983942	0.016058	0
African	Sub	1774	CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC=1.0000	CCGCTGCCCCTCACC=0.0000, CCGCTGCCCCTCACCGCCGCTGCCCCTCACC=0.0000, CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC=0.0000, CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC=0.0000	1.0	0.0	N/A
African Others	Sub	70	CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC=1.00	CCGCTGCCCCTCACC=0.00, CCGCTGCCCCTCACCGCCGCTGCCCCTCACC=0.00, CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC=0.00, CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC=0.00	1.0	0.0	N/A
African American	Sub	1704	CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC=1.0000	CCGCTGCCCCTCACC=0.0000, CCGCTGCCCCTCACCGCCGCTGCCCCTCACC=0.0000, CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC=0.0000, CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC=0.0000	1.0	0.0	N/A
Asian	Sub	74	CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC=1.00	CCGCTGCCCCTCACC=0.00, CCGCTGCCCCTCACCGCCGCTGCCCCTCACC=0.00, CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC=0.00, CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC=0.00	1.0	0.0	N/A
East Asian	Sub	60	CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC=1.00	CCGCTGCCCCTCACC=0.00, CCGCTGCCCCTCACCGCCGCTGCCCCTCACC=0.00, CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC=0.00, CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC=0.00	1.0	0.0	N/A
Other Asian	Sub	14	CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC=1.00	CCGCTGCCCCTCACC=0.00, CCGCTGCCCCTCACCGCCGCTGCCCCTCACC=0.00, CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC=0.00, CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC=0.00	1.0	0.0	N/A
Latin American 1	Sub	128	CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC=1.000	CCGCTGCCCCTCACC=0.000, CCGCTGCCCCTCACCGCCGCTGCCCCTCACC=0.000, CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC=0.000, CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC=0.000	1.0	0.0	N/A
Latin American 2	Sub	566	CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC=1.000	CCGCTGCCCCTCACC=0.000, CCGCTGCCCCTCACCGCCGCTGCCCCTCACC=0.000, CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC=0.000, CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC=0.000	1.0	0.0	N/A
South Asian	Sub	84	CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC=1.00	CCGCTGCCCCTCACC=0.00, CCGCTGCCCCTCACCGCCGCTGCCCCTCACC=0.00, CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC=0.00, CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC=0.00	1.0	0.0	N/A
Other	Sub	412	CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC=1.000	CCGCTGCCCCTCACC=0.000, CCGCTGCCCCTCACCGCCGCTGCCCCTCACC=0.000, CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC=0.000, CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC=0.000	1.0	0.0	N/A

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	14878	(CCGCTGCCCCTCACCG)₂CCGCTG(C)₄TCACC=0.99335	del(GCCGCTGCCCCTCACC)₂=0.00000, delGCCGCTG(C)₄TCACC=0.00639, dupGCCGCTG(C)₄TCACC=0.00020, ins(GCCGCTGCCCCTCACC)₃=0.00007
Allele Frequency Aggregator	European	Sub	11840	(CCGCTGCCCCTCACCG)₂CCGCTG(C)₄TCACC=0.99164	del(GCCGCTGCCCCTCACC)₂=0.00000, delGCCGCTG(C)₄TCACC=0.00802, dupGCCGCTG(C)₄TCACC=0.00025, ins(GCCGCTGCCCCTCACC)₃=0.00008
Allele Frequency Aggregator	African	Sub	1774	(CCGCTGCCCCTCACCG)₂CCGCTG(C)₄TCACC=1.0000	del(GCCGCTGCCCCTCACC)₂=0.0000, delGCCGCTG(C)₄TCACC=0.0000, dupGCCGCTG(C)₄TCACC=0.0000, ins(GCCGCTGCCCCTCACC)₃=0.0000
Allele Frequency Aggregator	Latin American 2	Sub	566	(CCGCTGCCCCTCACCG)₂CCGCTG(C)₄TCACC=1.000	del(GCCGCTGCCCCTCACC)₂=0.000, delGCCGCTG(C)₄TCACC=0.000, dupGCCGCTG(C)₄TCACC=0.000, ins(GCCGCTGCCCCTCACC)₃=0.000
Allele Frequency Aggregator	Other	Sub	412	(CCGCTGCCCCTCACCG)₂CCGCTG(C)₄TCACC=1.000	del(GCCGCTGCCCCTCACC)₂=0.000, delGCCGCTG(C)₄TCACC=0.000, dupGCCGCTG(C)₄TCACC=0.000, ins(GCCGCTGCCCCTCACC)₃=0.000
Allele Frequency Aggregator	Latin American 1	Sub	128	(CCGCTGCCCCTCACCG)₂CCGCTG(C)₄TCACC=1.000	del(GCCGCTGCCCCTCACC)₂=0.000, delGCCGCTG(C)₄TCACC=0.000, dupGCCGCTG(C)₄TCACC=0.000, ins(GCCGCTGCCCCTCACC)₃=0.000
Allele Frequency Aggregator	South Asian	Sub	84	(CCGCTGCCCCTCACCG)₂CCGCTG(C)₄TCACC=1.00	del(GCCGCTGCCCCTCACC)₂=0.00, delGCCGCTG(C)₄TCACC=0.00, dupGCCGCTG(C)₄TCACC=0.00, ins(GCCGCTGCCCCTCACC)₃=0.00
Allele Frequency Aggregator	Asian	Sub	74	(CCGCTGCCCCTCACCG)₂CCGCTG(C)₄TCACC=1.00	del(GCCGCTGCCCCTCACC)₂=0.00, delGCCGCTG(C)₄TCACC=0.00, dupGCCGCTG(C)₄TCACC=0.00, ins(GCCGCTGCCCCTCACC)₃=0.00

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 1	NC_000001.11:g.1433026_1433057del
GRCh38.p14 chr 1	NC_000001.11:g.1433026GCCGCTGCCCCTCACC[1]
GRCh38.p14 chr 1	NC_000001.11:g.1433026GCCGCTGCCCCTCACC[3]
GRCh38.p14 chr 1	NC_000001.11:g.1433026GCCGCTGCCCCTCACC[4]
GRCh38.p14 chr 1	NC_000001.11:g.1433026GCCGCTGCCCCTCACC[5]
GRCh38.p14 chr 1	NC_000001.11:g.1433026GCCGCTGCCCCTCACC[6]
GRCh38.p14 chr 1	NC_000001.11:g.1433026GCCGCTGCCCCTCACC[7]
GRCh37.p13 chr 1	NC_000001.10:g.1368406_1368437del
GRCh37.p13 chr 1	NC_000001.10:g.1368406GCCGCTGCCCCTCACC[1]
GRCh37.p13 chr 1	NC_000001.10:g.1368406GCCGCTGCCCCTCACC[3]
GRCh37.p13 chr 1	NC_000001.10:g.1368406GCCGCTGCCCCTCACC[4]
GRCh37.p13 chr 1	NC_000001.10:g.1368406GCCGCTGCCCCTCACC[5]
GRCh37.p13 chr 1	NC_000001.10:g.1368406GCCGCTGCCCCTCACC[6]
GRCh37.p13 chr 1	NC_000001.10:g.1368406GCCGCTGCCCCTCACC[7]

Gene: LINC01770, long intergenic non-protein coding RNA 1770 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
LINC01770 transcript variant 1	NR_125994.1:n.	N/A	Intron Variant
LINC01770 transcript variant 2	NR_125995.1:n.	N/A	Intron Variant
LINC01770 transcript variant 3	NR_125996.1:n.	N/A	Intron Variant

Gene: LOC107985729, uncharacterized LOC107985729 (plus strand) : 2KB Upstream Variant

Molecule type	Change	Amino acid[Codon]	SO Term
LOC107985729 transcript	XM_017003066.2:c.	N/A	Upstream Transcript Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(CCGCTGCCCCTCACCG)₂CCGCTG(C)₄TCACC=	del(GCCGCTGCCCCTCACC)₂	delGCCGCTG(C)₄TCACC	dupGCCGCTG(C)₄TCACC	dup(GCCGCTGCCCCTCACC)₂	ins(GCCGCTGCCCCTCACC)₃	ins(GCCGCTGCCCCTCACC)₄	ins(GCCGCTGCCCCTCACC)₅
GRCh38.p14 chr 1	NC_000001.11:g.1433011_1433057=	NC_000001.11:g.1433026_1433057del	NC_000001.11:g.1433026GCCGCTGCCCCTCACC[1]	NC_000001.11:g.1433026GCCGCTGCCCCTCACC[3]	NC_000001.11:g.1433026GCCGCTGCCCCTCACC[4]	NC_000001.11:g.1433026GCCGCTGCCCCTCACC[5]	NC_000001.11:g.1433026GCCGCTGCCCCTCACC[6]	NC_000001.11:g.1433026GCCGCTGCCCCTCACC[7]
GRCh37.p13 chr 1	NC_000001.10:g.1368391_1368437=	NC_000001.10:g.1368406_1368437del	NC_000001.10:g.1368406GCCGCTGCCCCTCACC[1]	NC_000001.10:g.1368406GCCGCTGCCCCTCACC[3]	NC_000001.10:g.1368406GCCGCTGCCCCTCACC[4]	NC_000001.10:g.1368406GCCGCTGCCCCTCACC[5]	NC_000001.10:g.1368406GCCGCTGCCCCTCACC[6]	NC_000001.10:g.1368406GCCGCTGCCCCTCACC[7]

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

31 SubSNP, 21 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	1000GENOMES	ss498764181	May 04, 2012 (137)
2	SWEGEN	ss2986159765	Nov 08, 2017 (151)
3	EVA_DECODE	ss3686004868	Jul 12, 2019 (153)
4	EVA_DECODE	ss3686004869	Jul 12, 2019 (153)
5	EVA_DECODE	ss3686004870	Jul 12, 2019 (153)
6	ACPOP	ss3726721553	Jul 12, 2019 (153)
7	ACPOP	ss3726721554	Jul 12, 2019 (153)
8	KOGIC	ss3943643814	Apr 25, 2020 (154)
9	KOGIC	ss3943643815	Apr 25, 2020 (154)
10	GNOMAD	ss3987019839	Apr 25, 2021 (155)
11	GNOMAD	ss3987019840	Apr 25, 2021 (155)
12	GNOMAD	ss3987019841	Apr 25, 2021 (155)
13	GNOMAD	ss3987019843	Apr 25, 2021 (155)
14	GNOMAD	ss3987019844	Apr 25, 2021 (155)
15	TOMMO_GENOMICS	ss5142083379	Apr 25, 2021 (155)
16	TOMMO_GENOMICS	ss5142083380	Apr 25, 2021 (155)
17	TOMMO_GENOMICS	ss5142083381	Apr 25, 2021 (155)
18	TOMMO_GENOMICS	ss5142083382	Apr 25, 2021 (155)
19	1000G_HIGH_COVERAGE	ss5240885354	Oct 12, 2022 (156)
20	HUGCELL_USP	ss5442130312	Oct 12, 2022 (156)
21	HUGCELL_USP	ss5442130313	Oct 12, 2022 (156)
22	HUGCELL_USP	ss5442130314	Oct 12, 2022 (156)
23	TOMMO_GENOMICS	ss5666234419	Oct 12, 2022 (156)
24	TOMMO_GENOMICS	ss5666234420	Oct 12, 2022 (156)
25	TOMMO_GENOMICS	ss5666234421	Oct 12, 2022 (156)
26	TOMMO_GENOMICS	ss5666234422	Oct 12, 2022 (156)
27	TOMMO_GENOMICS	ss5666234424	Oct 12, 2022 (156)
28	EVA	ss5831427996	Oct 12, 2022 (156)
29	EVA	ss5848750898	Oct 12, 2022 (156)
30	EVA	ss5906727694	Oct 12, 2022 (156)
31	EVA	ss5936593517	Oct 12, 2022 (156)
32	gnomAD - Genomes Submission ignored due to conflicting rows: Row 232896 (NC_000001.11:1433010::CCGCTGCCCCTCACCG 3341/134034) Row 232898 (NC_000001.11:1433010::CCGCTGCCCCTCACCGCCGCTGCCCCTCACCG 158/134056) Row 232902 (NC_000001.11:1433010::CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCG 5/134056)...	-	Apr 25, 2021 (155)
33	gnomAD - Genomes Submission ignored due to conflicting rows: Row 232896 (NC_000001.11:1433010::CCGCTGCCCCTCACCG 3341/134034) Row 232898 (NC_000001.11:1433010::CCGCTGCCCCTCACCGCCGCTGCCCCTCACCG 158/134056) Row 232902 (NC_000001.11:1433010::CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCG 5/134056)...	-	Apr 25, 2021 (155)
34	gnomAD - Genomes Submission ignored due to conflicting rows: Row 232896 (NC_000001.11:1433010::CCGCTGCCCCTCACCG 3341/134034) Row 232898 (NC_000001.11:1433010::CCGCTGCCCCTCACCGCCGCTGCCCCTCACCG 158/134056) Row 232902 (NC_000001.11:1433010::CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCG 5/134056)...	-	Apr 25, 2021 (155)
35	gnomAD - Genomes Submission ignored due to conflicting rows: Row 232896 (NC_000001.11:1433010::CCGCTGCCCCTCACCG 3341/134034) Row 232898 (NC_000001.11:1433010::CCGCTGCCCCTCACCGCCGCTGCCCCTCACCG 158/134056) Row 232902 (NC_000001.11:1433010::CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCG 5/134056)...	-	Apr 25, 2021 (155)
36	gnomAD - Genomes Submission ignored due to conflicting rows: Row 232896 (NC_000001.11:1433010::CCGCTGCCCCTCACCG 3341/134034) Row 232898 (NC_000001.11:1433010::CCGCTGCCCCTCACCGCCGCTGCCCCTCACCG 158/134056) Row 232902 (NC_000001.11:1433010::CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCG 5/134056)...	-	Apr 25, 2021 (155)
37	gnomAD - Genomes Submission ignored due to conflicting rows: Row 232896 (NC_000001.11:1433010::CCGCTGCCCCTCACCG 3341/134034) Row 232898 (NC_000001.11:1433010::CCGCTGCCCCTCACCGCCGCTGCCCCTCACCG 158/134056) Row 232902 (NC_000001.11:1433010::CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCG 5/134056)...	-	Apr 25, 2021 (155)
38	gnomAD - Genomes Submission ignored due to conflicting rows: Row 232896 (NC_000001.11:1433010::CCGCTGCCCCTCACCG 3341/134034) Row 232898 (NC_000001.11:1433010::CCGCTGCCCCTCACCGCCGCTGCCCCTCACCG 158/134056) Row 232902 (NC_000001.11:1433010::CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCG 5/134056)...	-	Apr 25, 2021 (155)
39	Korean Genome Project Submission ignored due to conflicting rows: Row 21815 (NC_000001.11:1433010:CCGCTGCCCCTCACCG: 3/1790) Row 21816 (NC_000001.11:1433026::CCGCTGCCCCTCACCG 13/1790)	-	Apr 25, 2020 (154)
40	Korean Genome Project Submission ignored due to conflicting rows: Row 21815 (NC_000001.11:1433010:CCGCTGCCCCTCACCG: 3/1790) Row 21816 (NC_000001.11:1433026::CCGCTGCCCCTCACCG 13/1790)	-	Apr 25, 2020 (154)
41	Northern Sweden Submission ignored due to conflicting rows: Row 6418 (NC_000001.10:1368390:CCGCTGCCCCTCACCG: 26/600) Row 6419 (NC_000001.10:1368390::CCGCTGCCCCTCACCG 5/600)	-	Jul 12, 2019 (153)
42	Northern Sweden Submission ignored due to conflicting rows: Row 6418 (NC_000001.10:1368390:CCGCTGCCCCTCACCG: 26/600) Row 6419 (NC_000001.10:1368390::CCGCTGCCCCTCACCG 5/600)	-	Jul 12, 2019 (153)
43	8.3KJPN Submission ignored due to conflicting rows: Row 52686 (NC_000001.10:1368390:CCGCTGCCCCTCACCG: 142/16508) Row 52687 (NC_000001.10:1368390::CCGCTGCCCCTCACCG 35/16508) Row 52688 (NC_000001.10:1368390:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCG: 1/16508)...	-	Apr 25, 2021 (155)
44	8.3KJPN Submission ignored due to conflicting rows: Row 52686 (NC_000001.10:1368390:CCGCTGCCCCTCACCG: 142/16508) Row 52687 (NC_000001.10:1368390::CCGCTGCCCCTCACCG 35/16508) Row 52688 (NC_000001.10:1368390:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCG: 1/16508)...	-	Apr 25, 2021 (155)
45	8.3KJPN Submission ignored due to conflicting rows: Row 52686 (NC_000001.10:1368390:CCGCTGCCCCTCACCG: 142/16508) Row 52687 (NC_000001.10:1368390::CCGCTGCCCCTCACCG 35/16508) Row 52688 (NC_000001.10:1368390:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCG: 1/16508)...	-	Apr 25, 2021 (155)
46	8.3KJPN Submission ignored due to conflicting rows: Row 52686 (NC_000001.10:1368390:CCGCTGCCCCTCACCG: 142/16508) Row 52687 (NC_000001.10:1368390::CCGCTGCCCCTCACCG 35/16508) Row 52688 (NC_000001.10:1368390:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCG: 1/16508)...	-	Apr 25, 2021 (155)
47	14KJPN Submission ignored due to conflicting rows: Row 71523 (NC_000001.11:1433010:CCGCTGCCCCTCACCG: 261/28210) Row 71524 (NC_000001.11:1433010::CCGCTGCCCCTCACCG 59/28210) Row 71525 (NC_000001.11:1433010:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCG: 1/28210)...	-	Oct 12, 2022 (156)
48	14KJPN Submission ignored due to conflicting rows: Row 71523 (NC_000001.11:1433010:CCGCTGCCCCTCACCG: 261/28210) Row 71524 (NC_000001.11:1433010::CCGCTGCCCCTCACCG 59/28210) Row 71525 (NC_000001.11:1433010:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCG: 1/28210)...	-	Oct 12, 2022 (156)
49	14KJPN Submission ignored due to conflicting rows: Row 71523 (NC_000001.11:1433010:CCGCTGCCCCTCACCG: 261/28210) Row 71524 (NC_000001.11:1433010::CCGCTGCCCCTCACCG 59/28210) Row 71525 (NC_000001.11:1433010:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCG: 1/28210)...	-	Oct 12, 2022 (156)
50	14KJPN Submission ignored due to conflicting rows: Row 71523 (NC_000001.11:1433010:CCGCTGCCCCTCACCG: 261/28210) Row 71524 (NC_000001.11:1433010::CCGCTGCCCCTCACCG 59/28210) Row 71525 (NC_000001.11:1433010:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCG: 1/28210)...	-	Oct 12, 2022 (156)
51	14KJPN Submission ignored due to conflicting rows: Row 71523 (NC_000001.11:1433010:CCGCTGCCCCTCACCG: 261/28210) Row 71524 (NC_000001.11:1433010::CCGCTGCCCCTCACCG 59/28210) Row 71525 (NC_000001.11:1433010:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCG: 1/28210)...	-	Oct 12, 2022 (156)
52	ALFA	NC_000001.11 - 1433011	Apr 25, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss5142083381	NC_000001.10:1368390:CCGCTGCCCCTCA… NC_000001.10:1368390:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCG:	NC_000001.11:1433010:CCGCTGCCCCTCA… NC_000001.11:1433010:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC:CCGCTGCCCCTCACC	(self)
ss3686004870, ss3987019844, ss5666234421	NC_000001.11:1433010:CCGCTGCCCCTCA… NC_000001.11:1433010:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCG:	NC_000001.11:1433010:CCGCTGCCCCTCA… NC_000001.11:1433010:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC:CCGCTGCCCCTCACC	(self)
10392323354	NC_000001.11:1433010:CCGCTGCCCCTCA… NC_000001.11:1433010:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC:CCGCTGCCCCTCACC	NC_000001.11:1433010:CCGCTGCCCCTCA… NC_000001.11:1433010:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC:CCGCTGCCCCTCACC	(self)
ss498764181, ss2986159765, ss3726721553, ss5142083379, ss5831427996, ss5936593517	NC_000001.10:1368390:CCGCTGCCCCTCA… NC_000001.10:1368390:CCGCTGCCCCTCACCG:	NC_000001.11:1433010:CCGCTGCCCCTCA… NC_000001.11:1433010:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC:CCGCTGCCCCTCACCGCCGCTGCCCCTCACC	(self)
ss3943643814, ss3987019843, ss5240885354, ss5442130313, ss5666234419, ss5848750898, ss5906727694	NC_000001.11:1433010:CCGCTGCCCCTCA… NC_000001.11:1433010:CCGCTGCCCCTCACCG:	NC_000001.11:1433010:CCGCTGCCCCTCA… NC_000001.11:1433010:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC:CCGCTGCCCCTCACCGCCGCTGCCCCTCACC	(self)
10392323354	NC_000001.11:1433010:CCGCTGCCCCTCA… NC_000001.11:1433010:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC:CCGCTGCCCCTCACCGCCGCTGCCCCTCACC	NC_000001.11:1433010:CCGCTGCCCCTCA… NC_000001.11:1433010:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC:CCGCTGCCCCTCACCGCCGCTGCCCCTCACC	(self)
ss3686004869	NC_000001.11:1433026:CCGCTGCCCCTCA… NC_000001.11:1433026:CCGCTGCCCCTCACCG:	NC_000001.11:1433010:CCGCTGCCCCTCA… NC_000001.11:1433010:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC:CCGCTGCCCCTCACCGCCGCTGCCCCTCACC	(self)
ss3726721554, ss5142083380	NC_000001.10:1368390::CCGCTGCCCCTC… NC_000001.10:1368390::CCGCTGCCCCTCACCG	NC_000001.11:1433010:CCGCTGCCCCTCA… NC_000001.11:1433010:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC	(self)
ss3987019839, ss5442130312, ss5666234420	NC_000001.11:1433010::CCGCTGCCCCTC… NC_000001.11:1433010::CCGCTGCCCCTCACCG	NC_000001.11:1433010:CCGCTGCCCCTCA… NC_000001.11:1433010:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC	(self)
10392323354	NC_000001.11:1433010:CCGCTGCCCCTCA… NC_000001.11:1433010:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC	NC_000001.11:1433010:CCGCTGCCCCTCA… NC_000001.11:1433010:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC	(self)
ss3943643815	NC_000001.11:1433026::CCGCTGCCCCTC… NC_000001.11:1433026::CCGCTGCCCCTCACCG	NC_000001.11:1433010:CCGCTGCCCCTCA… NC_000001.11:1433010:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC	(self)
ss3686004868	NC_000001.11:1433042::CCGCTGCCCCTC… NC_000001.11:1433042::CCGCTGCCCCTCACCG	NC_000001.11:1433010:CCGCTGCCCCTCA… NC_000001.11:1433010:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC	(self)
ss3987019840, ss5442130314, ss5666234424	NC_000001.11:1433010::CCGCTGCCCCTC… NC_000001.11:1433010::CCGCTGCCCCTCACCGCCGCTGCCCCTCACCG	NC_000001.11:1433010:CCGCTGCCCCTCA… NC_000001.11:1433010:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC	(self)
ss5142083382	NC_000001.10:1368390::CCGCTGCCCCTC… NC_000001.10:1368390::CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCG	NC_000001.11:1433010:CCGCTGCCCCTCA… NC_000001.11:1433010:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC	(self)
ss3987019841, ss5666234422	NC_000001.11:1433010::CCGCTGCCCCTC… NC_000001.11:1433010::CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCG	NC_000001.11:1433010:CCGCTGCCCCTCA… NC_000001.11:1433010:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC	(self)
10392323354	NC_000001.11:1433010:CCGCTGCCCCTCA… NC_000001.11:1433010:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC	NC_000001.11:1433010:CCGCTGCCCCTCA… NC_000001.11:1433010:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC	(self)
	NC_000001.11:1433010::CCGCTGCCCCTC… NC_000001.11:1433010::CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCG	NC_000001.11:1433010:CCGCTGCCCCTCA… NC_000001.11:1433010:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC	(self)
	NC_000001.11:1433010::CCGCTGCCCCTC… NC_000001.11:1433010::CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCG	NC_000001.11:1433010:CCGCTGCCCCTCA… NC_000001.11:1433010:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC:CCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACCGCCGCTGCCCCTCACC	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs201942185

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs201942185