GEO DataSets

(Submitter supplied) The NuRD complex is required for efficient and timely myelination in the peripheral nervous system. ChIP-chip assays were performed on rat sciatic nerve at P15, a peak timepoint of myelination, for binding of Chd4 to genes involved in regulating myelin formation. This experiment includes two custom ChIP-chip design incorporating many genes that are dynamically regulated during myelination. The antibodies used in this platform were Chd3/4 (Santa Cruz sc-11378) Chd4 (gift from Paul Wade), Mta2 (Santa Cruz sc-9447), and Nab2 (Santa Cruz sc-22815).

Organism:

Rattus norvegicus

Type:

Genome binding/occupancy profiling by genome tiling array

Platforms:

GPL13963 GPL10812

4 Samples

Download data: GFF, PAIR

(Submitter supplied) Egr1 regulates genes involved in cholesterol biosynthesis in liver. ChIP-chip assays were performed on H4IIE liver cells that were either treated or untreated with insulin for one hour. This experiment includes a custom ChIP-chip design incorporating many genes that are dynamically regulated by insulin signaling. The Egr1 antibody used was from Santa Cruz sc-189.

Organism:

Rattus norvegicus

Type:

Genome binding/occupancy profiling by genome tiling array

Platforms:

GPL10812 GPL13957

3 Samples

Download data: GFF, PAIR

(Submitter supplied) Egr2/Krox20 and Sox10 regulate genes involved in formation of myelination in the peripheral nervous system. ChIP-chip assays were performed on rat sciatic nerve at P15, a peak timepoint of myelination. In addition, Faire was used to identify areas of open chromatin. This experiment includes a custom ChIP-chip design incorporating many genes that are dynamically regulated during peripheral nerve myelination. more...

Organism:

Rattus norvegicus

Type:

Genome binding/occupancy profiling by genome tiling array

Platform:

GPL10812

7 Samples

Download data: GFF, PAIR

(Submitter supplied) Rn4 Protocol: http://www.nimblegen.com/

Organism:

Rattus norvegicus

3 Series

12 Samples

Download data: GFF, NDF, POS