Similar studies for GEO DataSets (Select 200028566) - GEO DataSets

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Items: 17

Select item 2000285661.

Effects of UV and temperature on gene expression in the snakelocks sea anemone

(Submitter supplied) We monitored gene expression response of the symbiotic sea anemone Anemonia viridis subjected to a thermal and/or UV stress. A symbiosis-dedicated oligonucleotide microarray (2000 selected features) was generated, representing to date the only available oligonucleotide array used for symbiotic cnidarians (GPL10546). We are describing here the expression evolution during the first phase (5 days) of the stress.

Organism:: Anemonia viridis

Type:: Expression profiling by array

Platform:: GPL10546
12 Samples

Download data: GPR

Series

Accession:: GSE28566

ID:: 200028566

Select item 2000285772.

Effects of UV and temperature stress on snakelocks sea anemone: ectoderm and endoderm

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Anemonia viridis

Type:: Expression profiling by array

Platform:: GPL10546
15 Samples

Download data: GPR

Series

Accession:: GSE28577

ID:: 200028577

Select item 2000285763.

Tissue specific differential expression in response to a thermal stress in the snakelocks sea anemone.

(Submitter supplied) Differential expression between endodermal (zooxanthellate) and ectodermal tissue layers in the endosymbiotic sea anemone Anemonia viridis has been analyzed for 3 specimens subjected to a thermal stress (+10°C) for a 2 days period. A symbiosis-dedicated oligonucleotide microarray (2000 selected features) was generated, representing to date the only available oligonucleotide array used for symbiotic cnidarians (GPL10546). more...

Organism:: Anemonia viridis

Type:: Expression profiling by array

Platform:: GPL10546
3 Samples

Download data: GPR

Series

Accession:: GSE28576

ID:: 200028576

Select item 2000223754.

Symbiosis in Anemonia viridis sea anemones

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Anemonia viridis

Type:: Expression profiling by array

Platform:: GPL10546
18 Samples

Download data: GPR

Series

Accession:: GSE22375

ID:: 200022375

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000223615.

Endoderm- vs ectoderm-specific expression of symbiosis genes in the snakelocks sea anemone

(Submitter supplied) Transcriptional comparison between endodermal and ectodermal compartment in symbiotic sea anemones Anemonia viridis were analysed in several specimens. We generated an oligonucleotide microarray (2000 selected features), which is to date the only available oligonucleotide array for symbiotic cnidarians. We were able to identify a subset of genes clearly involved in symbiosis.

Organism:: Anemonia viridis

Type:: Expression profiling by array

Platform:: GPL10546
8 Samples

Download data: GPR

Series

Accession:: GSE22361

ID:: 200022361

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000223606.

Transcriptomic adaptations to symbiotic life in cnidarians: symbiotic vs bleached Anemonia viridis sea anemones

(Submitter supplied) Transcriptional comparison between symbiotic and non-symbiotic (bleached) sea anemones Anemonia viridis were analysed in several specimens. We generated an oligonucleotide microarray (2000 selected features), which is to date the only available oligonucleotide array for symbiotic cnidarians. We were able to identify a subset of genes clearly involved in symbiosis.

Organism:: Anemonia viridis

Type:: Expression profiling by array

Platform:: GPL10546
10 Samples

Download data: GPR

Series

Accession:: GSE22360

ID:: 200022360

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2000106807.

Montastraea faveolata bleaching study

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Orbicella faveolata

Type:: Expression profiling by array

Platform:: GPL6515
26 Samples

Download data: GPR

Series

Accession:: GSE10680

ID:: 200010680

Select item 2000106328.

Mfaveolata time course bleaching experiment

(Submitter supplied) The declining health of coral reefs worldwide is likely to intensify in response to continued anthropogenic disturbance from coastal development, pollution, and climate change. In response to these stresses, reef-building corals may exhibit bleaching, which marks the breakdown in symbiosis between coral and zooxanthellae. Mass coral bleaching due to elevated water temperature can devastate coral reefs on a large geographic scale. more...

Organism:: Orbicella faveolata

Type:: Expression profiling by array

Platform:: GPL6515
16 Samples

Download data: GPR

Series

Accession:: GSE10632

ID:: 200010632

Select item 2000106309.

Mfaveolata single-time point bleaching experiment

Organism:: Orbicella faveolata

Type:: Expression profiling by array

Platform:: GPL6515
10 Samples

Download data: GPR

Series

Accession:: GSE10630

ID:: 200010630

Select item 20000395810.

Transcriptome analysis of a cnidarian – dinoflagellate mutualism reveals complex modulation of host gene expression

(Submitter supplied) Background: Cnidarian – dinoflagellate intracellular symbioses are one of the most important mutualisms in the marine environment. They form the trophic and structural foundation of coral reef ecosystems, and have played a key role in the evolutionary radiation and biodiversity of cnidarian species. Despite the prevalence of these symbioses, we still know very little about the molecular modulators that initiate, regulate, and maintain the interaction between these two different biological entities. more...

Organism:: Anthopleura elegantissima

Type:: Expression profiling by array

Platform:: GPL3286
11 Samples

Download data

Series

Accession:: GSE3958

ID:: 200003958

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 20002494911.

Differential sensitivity of coral larvae to natural levels of ultraviolet radiation (UVR) during the onset of larval competence

(Submitter supplied) Scleractinian corals are the major builders of the complex structural framework of coral reefs. They live in tropical waters around the globe where they are frequently exposed to potentially harmful ultraviolet radiation (UVR). Coral eggs and early embryonic stages are thought to be the most sensitive life stages of corals to UVR given that they are highly buoyant and remain near the sea surface for prolonged periods of time. more...

Organism:: Orbicella faveolata

Type:: Expression profiling by array

Platform:: GPL11119
30 Samples

Download data

Series

Accession:: GSE24949

ID:: 200024949

Select item 20001526212.

Symbiodinium clade content drives host transcriptome more than thermal stress in the coral Montastraea faveolata

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Orbicella faveolata

Type:: Expression profiling by array

Platform:: GPL7317
33 Samples

Download data: MEV

Series

Accession:: GSE15262

ID:: 200015262

Select item 20001525313.

Symbiodinium clade content drives host transcriptome more than thermal stress in the coral Montastraea faveolata part 2

(Submitter supplied) A mutualistic relationship between reef-building corals and endosymbiotic algae (Symbiodinium spp.) forms the basis for the existence of coral reefs. Genotyping tools for Symbiodinium spp. have added a new level of complexity to studies concerning cnidarian growth, nutrient acquisition, and stress. For example, the response of the coral holobiont to thermal stress is connected to the host-Symbiodinium genotypic combination, as different partnerships can have different bleaching susceptibilities. more...

Organism:: Orbicella faveolata

Type:: Expression profiling by array

Platform:: GPL7317
15 Samples

Download data: MEV, TXT

Series

Accession:: GSE15253

ID:: 200015253

Select item 20001280914.

Symbiodinium clade content drives host transcriptome more than thermal stress in the coral Montastraea faveolata (part 1)

(Submitter supplied) Given the overwhelming evidence that symbiont genotypes differentially affect host processes such as growth, bleaching susceptibility, and nutrient acquisition, we set out to measure gene expression differences in fragments of Montastraea faveolata harboring two different clades of Symbiodinium. On the reefs near Puerto Morelos, México, colonies of M. faveolata are known to shift algal symbiont clade with depth, often associating with clade A at the top, clade B in the middle, and clade C near the bottom of the colony. more...

Organism:: Orbicella faveolata

Type:: Expression profiling by array

Platform:: GPL7317
18 Samples

Download data: MEV

Series

Accession:: GSE12809

ID:: 200012809

Select item 20002511115.

Transcriptomic responses to salinity stress in invasive and native blue mussels (genus Mytilus)

(Submitter supplied) The invasive marine mussel Mytilus galloprovincialis has displaced the native congener Mytilus trossulus from central and southern California, but the native species remains dominant at more northerly sites that have high levels of freshwater input. To determine the extent to which interspecific differences in physiological tolerance to low salinity might explain limits to the invasive species’ biogeography, we used an oligonucleotide microarray to compare the transcriptional responses of these two species to an acute decrease in salinity. more...

Organism:: Mytilus galloprovincialis; Mytilus trossulus; Mytilus californianus

Type:: Expression profiling by array

Platform:: GPL11156
36 Samples

Download data: TXT

Series

Accession:: GSE25111

ID:: 200025111

Select item 20001492316.

The host transcriptome remains unaltered during the establishment of coral-algal symbioses

(Submitter supplied) Coral reefs are based on the symbiotic relationship between corals and photosynthetic dinoflagellates of the genus Symbiodinium. We followed gene expression of coral larvae of Acropora palmata and Montastraea faveolata after exposure to Symbiodinium strains that differed in their ability to establish symbioses. We show that the coral host transcriptome remains almost unchanged during infection by competent symbionts, but is massively altered by symbionts that fail to establish symbioses. more...

Organism:: Acropora palmata; Orbicella faveolata

Type:: Expression profiling by array

Platforms:: GPL8208 GPL8215
36 Samples

Download data: MEV

Series

Accession:: GSE14923

ID:: 200014923

Select item 20001820517.

Microarray analysis of heat and/or drought sensitivity of early grain development in wheat (Triticum aestivum L.)

(Submitter supplied) Based on EST-based in silico gene expression analysis a 15k oligonucleotid microarray has been developped in order to monitor environmental stress-dependent gene expression changes in the wheat caryopsis. Using this array, the effect of water withdrawal, with and and without additional heat stress, during the first five days of grain development (0-5 DAA) has been investigated on two wheat cultivars differing in their drought sensitivity. more...