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icd-1 Transcription factor BTF3 homolog [ Caenorhabditis elegans ]

Gene ID: 174090, updated on 9-Dec-2024

Summary

Official Symbol
icd-1
Official Full Name
Transcription factor BTF3 homolog
Primary source
WormBase:WBGene00002045
Locus tag
CELE_C56C10.8
See related
AllianceGenome:WB:WBGene00002045
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Involved in embryo development and negative regulation of apoptotic process. Located in mitochondrion. Is expressed in several structures, including germ line; intestine; pharynx; preanal ganglion; and somatic nervous system. Orthologous to human BTF3 (basic transcription factor 3) and BTF3L4 (basic transcription factor 3 like 4). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

See icd-1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
5
Sequence:
Chromosome: II; NC_003280.10 (6587577..6588655, complement)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Protein kinase domain-containing protein Neighboring gene protein of unknown function DB domain-containing protein Neighboring gene putative trafficking protein particle complex subunit 13 homolog Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Charged multivesicular body protein 4b Neighboring gene 45 kDa calcium-binding protein

Interactions

General gene information

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in cytoplasm  
is_active_in cytosol  
located_in mitochondrion PubMed 
located_in mitochondrion  
part_of nascent polypeptide-associated complex  
located_in nucleus  

General protein information

Preferred Names
Transcription factor BTF3 homolog
NP_495336.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    6587577..6588655 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_062935.10 → NP_495336.1  Transcription factor BTF3 homolog [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_495336.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q18885
    Conserved Domains (1) summary
    pfam01849
    Location:45 → 96
    NAC; NAC domain
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