W07A12.4 BTB domain-containing protein [Caenorhabditis elegans] - Gene

Summary

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Official Symbol: W07A12.4
Official Full Name: BTB domain-containing protein
Primary source: WormBase:WBGene00012322
Locus tag: CELE_W07A12.4
See related: AllianceGenome:WB:WBGene00012322
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Caenorhabditis elegans (strain: Bristol N2)
Lineage: Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary: Orthologous to human BTBD17 (BTB domain containing 17). [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See W07A12.4 in Genome Data Viewer

Location:: chromosome: II

Exon count:: 14

Sequence:: Chromosome: II; NC_003280.10 (9146261..9152469)

Chromosome II - NC_003280.10 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

W07A12.4 (e-PCR)
- UniSTS:312957

Homology

Orthologs from OrthoDB

General protein information

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Preferred Names: BTB domain-containing protein

NP_001343736.1

Confirmed by transcript evidence

NP_001343738.1

Partially confirmed by transcript evidence

NP_001368661.1

Confirmed by transcript evidence

NP_495951.2

Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003280.10 Reference assembly

Range

9146261..9152469

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_001356882.5 → NP_001343736.1 BTB domain-containing protein [Caenorhabditis elegans]

Status: REVIEWED

UniProtKB/TrEMBL

A0A2C9C3D9

Conserved Domains (2) summary

smart00875
Location:236 → 342

BACK; BTB And C-terminal Kelch

cd18292
Location:108 → 219

BTB_POZ_BTBD17; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing protein 17 (BTBD17)
NM_001381555.1 → NP_001368661.1 BTB domain-containing protein [Caenorhabditis elegans]

Status: REVIEWED

UniProtKB/TrEMBL

A0A2C9C389

Conserved Domains (2) summary

smart00875
Location:156 → 262

BACK; BTB And C-terminal Kelch

cd18292
Location:28 → 139

BTB_POZ_BTBD17; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing protein 17 (BTBD17)
NM_001356884.3 → NP_001343738.1 BTB domain-containing protein [Caenorhabditis elegans]

Status: REVIEWED

UniProtKB/TrEMBL

A0A2C9C2J8

Conserved Domains (2) summary

smart00875
Location:154 → 260

BACK; BTB And C-terminal Kelch

cd18292
Location:26 → 137

BTB_POZ_BTBD17; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing protein 17 (BTBD17)
NM_063550.6 → NP_495951.2 BTB domain-containing protein [Caenorhabditis elegans]

See identical proteins and their annotated locations for NP_495951.2

Status: REVIEWED

UniProtKB/TrEMBL

G5EEX6

Conserved Domains (2) summary

smart00875
Location:156 → 262

BACK; BTB And C-terminal Kelch

cd18292
Location:28 → 139

BTB_POZ_BTBD17; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing protein 17 (BTBD17)