U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    W07A12.4 BTB domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 174454, updated on 2-Nov-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    W07A12.4
    Official Full Name
    BTB domain-containing protein
    Primary source
    WormBase:WBGene00012322
    Locus tag
    CELE_W07A12.4
    See related
    AllianceGenome:WB:WBGene00012322
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Orthologous to human BTBD17 (BTB domain containing 17). [provided by Alliance of Genome Resources, Nov 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See W07A12.4 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    14
    Sequence:
    Chromosome: II; NC_003280.10 (9146261..9152469)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Secreted protein Neighboring gene Seven TM Receptor;Transmembrane protein Neighboring gene ncRNA Neighboring gene Col_cuticle_N domain-containing protein Neighboring gene Acyltransferase 3 domain-containing protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    BTB domain-containing protein
    NP_001343736.1
    • Confirmed by transcript evidence
    NP_001343738.1
    • Partially confirmed by transcript evidence
    NP_001368661.1
    • Confirmed by transcript evidence
    NP_495951.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      9146261..9152469
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001356882.5 → NP_001343736.1  BTB domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A2C9C3D9
      Conserved Domains (2) summary
      smart00875
      Location:236 → 342
      BACK; BTB And C-terminal Kelch
      cd18292
      Location:108 → 219
      BTB_POZ_BTBD17; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing protein 17 (BTBD17)

    2. NM_001381555.1 → NP_001368661.1  BTB domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A2C9C389
      Conserved Domains (2) summary
      smart00875
      Location:156 → 262
      BACK; BTB And C-terminal Kelch
      cd18292
      Location:28 → 139
      BTB_POZ_BTBD17; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing protein 17 (BTBD17)

    3. NM_001356884.3 → NP_001343738.1  BTB domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A2C9C2J8
      Conserved Domains (2) summary
      smart00875
      Location:154 → 260
      BACK; BTB And C-terminal Kelch
      cd18292
      Location:26 → 137
      BTB_POZ_BTBD17; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing protein 17 (BTBD17)

    4. NM_063550.6 → NP_495951.2  BTB domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_495951.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      G5EEX6
      Conserved Domains (2) summary
      smart00875
      Location:156 → 262
      BACK; BTB And C-terminal Kelch
      cd18292
      Location:28 → 139
      BTB_POZ_BTBD17; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing protein 17 (BTBD17)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools