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    SMO1-2 sterol C4-methyl oxidase 1-2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828374, updated on 18-Sep-2024

    Summary

    Official Symbol
    SMO1-2
    Official Full Name
    sterol C4-methyl oxidase 1-2
    Primary source
    TAIR:AT4G22756
    Locus tag
    AT4G22756
    See related
    Araport:AT4G22756
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATSMO1; ATSMO1-2; SMO1; STEROL 4-ALPHA-METHYL-OXIDASE 1; STEROL C4-METHYL OXIDASE 1; sterol C4-methyl oxidase 1-2
    Summary
    Encodes a member of the SMO1 family of sterol 4alpha-methyl oxidases. More specifically functions as a 4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha- methyl oxidase.
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    Genomic context

    See SMO1-2 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    5
    Sequence:
    Chromosome: 4; NC_003075.7 (11954840..11956918, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene methylsterol monooxygenase 1-3 Neighboring gene tRNA-Lys Neighboring gene PPR containing protein Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene ncRNA

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    General gene information

    NM_118404.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables C-4 methylsterol oxidase activity PubMed 
    enables C-4 methylsterol oxidase activity PubMed 
    enables iron ion binding  
    enables protein binding PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum PubMed 

    General protein information

    Preferred Names
    sterol C4-methyl oxidase 1-2
    NP_567670.1
    • sterol C4-methyl oxidase 1-2 (SMO1-2); FUNCTIONS IN: C-4 methylsterol oxidase activity, 4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha-methyl oxidase activity, catalytic activity; INVOLVED IN: sterol biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: sterol-4alpha-methyl oxidase 1-1 (TAIR:AT4G12110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      11954840..11956918 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118404.5 → NP_567670.1  sterol C4-methyl oxidase 1-2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567670.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q1EC69, Q8GT72, Q8LAD9
      UniProtKB/TrEMBL
      A0A178V1A7, A0A7G2F4P7
      Conserved Domains (1) summary
      pfam04116
      Location:132 → 267
      FA_hydroxylase; Fatty acid hydroxylase superfamily
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