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    rps-28 Small ribosomal subunit protein eS28 [ Caenorhabditis elegans ]

    Gene ID: 176975, updated on 9-Dec-2024

    Summary

    Official Symbol
    rps-28
    Official Full Name
    Small ribosomal subunit protein eS28
    Primary source
    WormBase:WBGene00004497
    Locus tag
    CELE_Y41D4B.5
    See related
    AllianceGenome:WB:WBGene00004497
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be a structural constituent of ribosome. Predicted to be involved in cytoplasmic translation; maturation of SSU-rRNA; and ribosomal small subunit assembly. Predicted to be located in cytoplasmic side of rough endoplasmic reticulum membrane and ribosome. Predicted to be part of cytosolic small ribosomal subunit. Human ortholog(s) of this gene implicated in Diamond-Blackfan anemia 15 with mandibulofacial dysostosis. Orthologous to human RPS28 (ribosomal protein S28). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See rps-28 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    2
    Sequence:
    Chromosome: IV; NC_003282.8 (1659691..1659997)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene TPR-like protein Neighboring gene ncRNA Neighboring gene G_PROTEIN_RECEP_F1_2 domain-containing protein

    Pathways from PubChem

    Interactions

    General gene information

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables structural constituent of ribosome  
    enables structural constituent of ribosome  
    Process Evidence Code Pubs
    involved_in cytoplasmic translation  
    involved_in maturation of SSU-rRNA  
    involved_in ribosomal small subunit assembly  
    involved_in translation  
    Component Evidence Code Pubs
    located_in cytoplasm  
    located_in cytoplasmic side of rough endoplasmic reticulum membrane  
    located_in cytosol  
    part_of cytosolic small ribosomal subunit  
    part_of cytosolic small ribosomal subunit  
    located_in endoplasmic reticulum  
    part_of ribonucleoprotein complex  
    located_in ribosome  
    located_in ribosome  
    located_in rough endoplasmic reticulum  

    General protein information

    Preferred Names
    Small ribosomal subunit protein eS28
    NP_001370541.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      1659691..1659997
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001383043.2 → NP_001370541.1  Small ribosomal subunit protein eS28 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q95Y04
      Conserved Domains (1) summary
      cd04457
      Location:5 → 65
      S1_S28E; S28E, S1-like RNA-binding domain. S1-like RNA-binding domains are found in a wide variety of RNA-associated proteins. S28E protein is a component of the 30S ribosomal subunit. S28E is highly conserved among archaea and eukaryotes. S28E may control ...
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