GEO help: Mouse over screen elements for information.
Status
Public on Nov 23, 2011
Title
NIAID Mmeb - Mouse 44k - mAdb [OligID version]
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Mus musculus Manufacturer
Agilent Technologies
Manufacture protocol
See manufacturer's web site at http://www.agilent.com/
Description
NIAID Mmeb 44k (37.5k reporters) derived from Operon Mouse V4 oligo set. Length 60 bp probe sequences were generated by extracting base 10 through base 69 from the original 70 bp Operon probe. Agilent design number is 017138. For direct access, please contact [email protected] .
Web link
http://rtb.niaid.nih.gov Submission date
Nov 22, 2011
Last update date
Nov 30, 2011
Contact name
Natalia Shulzhenko
E-mail(s)
[email protected] , [email protected] Organization name
NIAID, USA
Department
Laboratory of Cellular and Molecular Immunology
Lab
Ghost lab
Street address
9000 Rockville Pike
City
Bethesda
State/province
MD
ZIP/Postal code
20892
Country
USA
Samples (32)
GSM838339 , GSM838340 , GSM838341 , GSM838342 , GSM838343 , GSM838344
GSM838345 ,
GSM838346 ,
GSM838347 ,
GSM838348 ,
GSM838349 ,
GSM838350 ,
GSM838351 ,
GSM838352 ,
GSM838353 ,
GSM838354 ,
GSM838355 ,
GSM838356 ,
GSM838357 ,
GSM838358 ,
GSM838359 ,
GSM838360 ,
GSM838361 ,
GSM838362 ,
GSM838363 ,
GSM838364 ,
GSM838365 ,
GSM838366 ,
GSM838367 ,
GSM838368 ,
GSM838369 ,
GSM838370 Series (3)
GSE23934 Crosstalk between B lymphocytes, microbiota and the intestinal epithelium governs immunity versus metabolism in the gut
GSE33884 The role of immunoglobulin A
GSE33885 The role of transcription factor Gata4
Data table header descriptions ID Oligo ID
GB_ACC GenBank Accession number (vendor assigned)
GB_ACC RefSeq Accession number (mAdb assigned)
GENE Gene Name
UNIGENE UniGene ID Build #Mm.180
DESCRIPTION Gene Description
SEQUENCE Sequence of the oligo probe
SPOT_ID
Data table ID GB_ACC GB_ACC GENE UNIGENE DESCRIPTION SEQUENCE SPOT_ID GE_BrightCorner
Control
Control
AF159801
Unknown
CTAGGCTACCTATCGAAGGGTGGGGTGGTGCCACCTCCGTGCTGTGCAGGAGTCAAAAAG
AF159803
Unknown
CTGGTTCTTGCTTTACACTGCGGTGAAGCAGCCGTGTCTTGCAACACGGTGATTGCGGAT
AF168390
Unknown
TTGCCTGGGACAACTGCTTTTGGTATTGCTGTGGCAGCTATAATCATGGCTCGAACTGGG
AF191028
Unknown
CACGATTACTCCATCGTTGGATACTCCCCCGAGGATTTGGAATCTCATGACAAACTCATA
AF198054
Unknown
TCGCTTCCTCCACTGATGGATCCTTACATCAACTTTGACCAAGAACCCTCTTCTTATCTC
AF247559
Unknown
AAAGACCTTGGCTGCAAGTGGGTCATTCTTGGGCATTCCGAACGGAGACATGTCATCGGA
ATU91966
Unknown
ATCTTCTACTGGTACATGGACAACTGTGTGGACCGATGGGCTTACCAGCCTTGATCGTTA
M200000001
NM_008263 NM_001122950 Hoxa10
5
homeo box A10 (Hoxa10), transcript variant 2, mRNA.
TAGGTGGGCTGGGGCAAGCAGAAATAAAAATGAGAGAAGGGAGATATTGTTTGGATTTCC
M200000002
NM_011701 NM_011701 Vim
268000
vimentin (Vim), mRNA.
TCTCTGCCTCTGCCAACCTTTTCTTCCCTGAACCTGAGAGAAACTAACCTGGAGTCACTT
M200000004
NM_009272 NM_009272 Srm
10
spermidine synthase (Srm), mRNA.
ATCTTCCAAGTTGTCTGGGGACCACCAGTCCTGGACCAGACTCCCAGATGACTCTTGCCC
M200000005
NM_008657 NM_008657 Myf6
11
myogenic factor 6 (Myf6), mRNA.
TGGCCAAGTGTTTCGGATCATTCCAGGGGCCTCGTGATAACTGCTAAGGAAGGAGGAGCA
M200000006
NM_012060 NM_012060 Bcap31
17
B-cell receptor-associated protein 31 (Bcap31), mRNA.
CTGGCCTGCAGTTTGAACCCCTTTTTATTTTGCAATGTACCCTAAAGGAGGCTGCTGTGA
M200000007
NM_017461 NM_017461 40787
18
septin 1 (Sept1), mRNA.
AATATCATCCCGGTCATCGGTAAAGCAGACGCCCTGATGCCTAGGGAGACTCAGGCCCTC
M200000008
AK005451 Erv3
22
Endogenous retroviral sequence 3, mRNA (cDNA clone MGC:117611 IMAGE:30522905)
GCAAACTCGCTCAGACTGTAAGGACCCAAATTATGGAGGATGTCCACACTGGGGCTGCAA
M200000009
NM_010448 NM_010448 Hnrnpab
280842
heterogeneous nuclear ribonucleoprotein A/B (Hnrnpab), transcript variant 2, mRNA.
ACGACCGCACACGCTTTGTTTGGACGCGGAGTGAACACAATTATGTACCAAATTTAACTT
M200000010
AK014509 NM_008087 Gas2
207360
growth arrest specific 2 (Gas2), mRNA.
GCCCCTTAGGAATAGCAGGTACCTTTTACACACAGAGAAGCTGTGTTTAGGATGATCACT
M200000011
NM_009745 NM_009745 Bcl7b
405834
B-cell CLL/lymphoma 7B (Bcl7b), mRNA.
CGTGGGGTCGTCGCACCATCTTCTTGTTCCTGACACTTGTGTCTGCTTGCTCTTGAGCAA
M200000012
NM_011991 NM_011991 Cops3
40
COP9 (constitutive photomorphogenic) homolog, subunit 3 (Arabidopsis thaliana) (Cops3), mRNA.
AGCAATGCTTACCATGAGTTAGCACAAGTTTATTCAACCAACAACCCGTCTGAGCTGCGG
M200000014
NM_010858 NM_010858 Myl4
390355
myosin, light polypeptide 4 (Myl4), mRNA.
AAGGACTCTGCCTTTGACCCAAAGAGTGTGAAGATAGACTTCAGTGCTGACCAGATCGAA
35958 5158 Kbytes .Supplementary data files not provided
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