GEO Accession viewer

GSE86415	Histone H3 Lysine 4 trimethylation (H3K4me3) ChIP-Seq and RNA-seq of narrower and wider vanes of primary remiges
GSE86592	Developmental programs in chicken early embryos by whole transcriptome analysis.
GSE87247	Chicken embryonic E16 scutate scale and feather samples
GSE87250	Multiple regulatory modules are required for scale-to-feather conversion
GSE100798	Avian zygote activates only maternal allele to disburden high variation of supernumerary sperms contrary to mammal
GSE101403	Transcriptional Profiling of the Chicken Tracheal Response to Virulent Mycoplasma gallisepticum Strain Rlow
GSE101746	DAN (NBL1) promotes collective neural crest migration by restraining uncontrolled invasion
GSE102353	NANOG is required for the long-term establishment of avian somatic reprogrammed cells [chicken]
GSE109970	NANOG is required for the long-term establishment of avian somatic reprogrammed cells
GSE111098	ATAC-Seq of chicken embryonic metatarsal skin treated with RCAS-CTNNB1, RCAS-GFP, and retinoic acid
GSE111101	Transcriptome analyses of reprogrammed feather / scale chimeric explants revealed co-expressed epithelial gene networks during organ specification
GSE114103	Transciptomic profiling of the uterii of laying and non-laying hens using RNA-seq
GSE114662	Genome wide analysis of chick limb bud tissue treated with FGF2 for 3hrs (RNA-Seq)
GSE114663	Genome wide analysis of chick limb bud tissue treated with FGF2 for 3 hrs
GSE115559	Similarities and differences in the regulation of HoxD genes during chick and mouse limb development [RNA-Seq]
GSE115562	Similarities and differences in the regulation of HoxD genes during chick and mouse limb development [Capture Hi-C]
GSE115563	Similarities and differences in the regulation of HoxD genes during chick and mouse limb development.
GSE119488	Evolution of Replication Origins in Vertebrate Genomes: Rapid Turnover Despite Selective Constraints [SNS-seq]
GSE120498	Characterisation of the outflow tract banded heart utilising RNA sequencing to direct functional analysis
GSE120823	RNA-Seq of adult chicken sickle feather tissues between male and female
GSE121318	Reconstruction of the global neural crest gene regulatory network in vivo [ATAC-seq]
GSE121331	Reconstruction of the global neural crest gene regulatory network in vivo [CRISPR_RNA-seq]
GSE121527	Reconstruction of the global neural crest gene regulatory network in vivo
GSE123588	Transciptomic profiling of the magnum of laying and non-laying hens using RNA-seq
GSE124907	Gallus gallus reference-based transcriptome analysis of SRSF1-3 knock-in clones in DT40-ASF cells
GSE125197	Molecular Profiling defines evolutionarily conserved transcription factor signatures of major vestibulospinal neuron groups
GSE125707	Early chromatin shaping predetermines multipotent vagal neural crest into neural, neuronal and mesenchymal lineages
GSE125709	Early shaping of the chromatin landscape specifies vagal neural crest into distinct lineages [RNA-seq]
GSE125710	Early chromatin shaping predetermines multipotent vagal neural crest into neural, neuronal and mesenchymal lineages [CRISPR RNA-seq]
GSE125711	Early chromatin shaping predetermines multipotent vagal neural crest into neural, neuronal and mesenchymal lineages
GSE126880	Heterodimerization of Tfap2 pioneer factors drives epigenomic remodeling during neural crest specification
GSE128350	Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta
GSE130439	Single cell transcriptomes of developing chicken hind limbs at stages HH25, HH29 and HH31
GSE130500	Reconstruction of the global neural crest gene regulatory network in vivo [RNA-seq]
GSE131363	The effects of testosterone and corticosterone treatment on gene expression in germinal discs of the laying hen
GSE131688	Reconstruction of the global neural crest gene regulatory network in vivo [single cell]
GSE131737	Early chromatin shaping predetermines multipotent vagal neural crest into neural, neuronal and mesenchymal lineages [RNA-seq and ChIP-seq]
GSE134542	Innate immune genes up-regulated during infectious bursal disease virus infection in chicken embryos
GSE134705	Cross-species analysis across 450 million years of evolution reveals conservation and divergence of the microglia program (scRNA-seq)
GSE134706	Cross-species analysis across 450 million years of evolution reveals conservation and divergence of the microglia program (bulk RNA-seq)
GSE134707	Cross-species analysis across 450 million years of evolution reveals conservation and divergence of the microglia program
GSE135553	Viral transcriptomic analysis of single cell-sorted of DF1 or MDCK cell lines infected with influenza A virus
GSE135572	Probe-Seq enables transcriptional profiling of specific cell types from heterogeneous tissue by RNA-based isolation
GSE136224	Folding Keratin Gene Clusters During Skin Specification
GSE136774	Attenuated FGF signaling underlies the forelimb heterochrony in the emu Dromaius novaehollandiae (RNA-seq data)
GSE136775	Attenuated FGF signaling underlies the forelimb heterochrony in the emu Dromaius novaehollandiae (ATAC-seq data)
GSE136776	Attenuated FGF signaling underlies the forelimb heterochrony in the emu Dromaius novaehollandiae
GSE137219	miR-302 is a temporal regulator of neural crest development [Chicken miRNA-seq]
GSE137241	miR-302 is a temporal regulator of neural crest development
GSE137462	Early chromatin shaping predetermines multipotent vagal neural crest into neural, neuronal and mesenchymal lineages [scRNA-seq]
GSE142101	Metabolic reprogramming promotes neural crest migration via Yap/Tead signaling
GSE143337	New insights into gonadal sex differentiation provided by single cell transcriptomics in the chicken embryo
GSE149310	Next generation sequencing of chicken otocyst with pharmacologically induced loss-of-Wnt signalling
GSE149457	Spatiotemporal single-cell RNA sequencing of developing chicken hearts identifies interplay between cellular differentiation and morphogenesis
GSE150006	The connectome of neural crest enhancers reveals regulatory features of signaling systems
GSE150007	Post-transcriptional tuning of FGF signaling mediates neural crest induction
GSE151467	cis-regulation of Grem1 expression during limb development [ATAC HH24]
GSE151488	cis-regulation of Grem1 expression during limb development
GSE151697	Cis-regulatory dissection of cone development reveals a broad role for Otx2 and Oc transcription factors [CUT&RUN]
GSE151707	Cis-regulatory dissection of cone development reveals a broad role for Otx2 and Oc transcription factors [ATAC-seq]
GSE151947	Onecut1 and Otx2 directly regulate multiple genes expressed early in cone and horizontal cell development [scRNA-seq]
GSE151948	Cis-regulatory dissection of cone development reveals a broad role for Otx2 and Oc transcription factors
GSE152599	A regulatory sub-circuit downstream of Wnt signaling controls developmental transitions in neural crest development
GSE153029	Transcriptional landscape of the embryonic chicken Müllerian duct
GSE153566	Clustering of strong replicators associated with active promoters is sufficient to establish an early-replicating domain
GSE157129	RNA-seq profiling of RPE reprogramming
GSE161220	Regeneration of dermal papilla stem cells and mesenchymal components during feather cycling
GSE161497	Gene expression across 4 and 24 hours of growth modulating paradigms in chicks
GSE161638	Next generation sequencing of chicken otocyst with pharmacologicaly induced loss-of-Wnt signalling
GSE161905	Single cell sequencing of posterior axis development in gallus gallus
GSE162385	Gene expression in chicken skin cells cultured in vitro
GSE164736	Chromatin remodeling and expression dynamics reveal conserved and species-specific regulation during mouse and chicken limb development [ATAC-seq]
GSE164737	Chromatin remodeling and expression dynamics reveal conserved and species-specific regulation during mouse and chicken limb development [RNA-seq]
GSE164738	Chromatin remodeling and expression dynamics reveal conserved and species-specific regulation during mouse and chicken limb development
GSE166981	Unexpected contribution of fibroblasts to the muscle lineage during foetal myogenesis and role of BMP signalling in this process
GSE171649	Single-cell analysis of early chick hypothalamic development reveals that hypothalamic cells are induced from prethalamic-like progenitors.
GSE171864	RNA sequencing identifies sub-clinical hepatic response to stocking density
GSE174565	Single cell transcriptomes of developing chicken hind limbs at stages HH21, HH24 and HH27
GSE174603	Whole-transcriptome sequencing of the chicken embryonic fibroblast, EGK.X blastoderm, and primordial germ cells
GSE178651	Regional specific differentiation of integumentary organs: SATB2 is involved in α- and β-keratin gene cluster switching in the chicken
GSE180176	Immunoglobulin enhancers increase RNA polymerase 2 stalling at somatic hypermutation target sequences [GRO-seq]
GSE180177	Immunoglobulin enhancers increase RNA polymerase 2 stalling at somatic hypermutation target sequences [ChIP-Seq]
GSE180178	Immunoglobulin enhancers increase RNA polymerase 2 stalling at somatic hypermutation target sequences
GSE180434	Deciphering the resiquimod induced toll-like receptor signalling pathway in chickens
GSE181577	Segregation of neural crest specific lineage trajectories from a heterogeneous neural plate border territory only emerges at neurulation
GSE185078	An antibody independent verification method quantifies m6A in the chicken β-actin zipcode
GSE193063	Transcriptomic analysis of attenuated Salmonella Typhimurium infected chicken primary macrophages
GSE195592	Developmental and evolutionary comparative analysis of a HoxD regulatory landscape in mammals and birds
GSE196761	Genome-wide replication fork directionality measured by strand-specific sequencing of Okazaki fragments in chicken lymphoma cells (DT40).
GSE196999	Next generation sequencing of chicken otocyst with gain- and loss-of-Notch signalling activity
GSE203031	Developmental and evolutionary comparative analysis of a HoxD regulatory landscape in mammals and birds [ATAC-Seq]
GSE205391	Effect of ectopic expression of EtROP2 kinase on gene expression of avian epithelial cells (Clec213)
GSE206191	RNA polymerase II pausing contributes to maintain chromatin organization in erythrocytes [ATAC-seq]
GSE206192	RNA polymerase II pausing contributes to maintain chromatin organization in erythrocytes [Hi-C]
GSE206194	RNA polymerase II pausing contributes to maintain chromatin organization in erythrocytes
GSE208178	Interspecific single-cell transcriptomic analysis reveals differences in signaling pathways governing gonadal primordial germ cells between chicken and zebra finch (Taeniopygia guttata) [chicken scRNA-seq]
GSE212831	Cell-type identity of the avian utricle
GSE227027	Comparative Gene Expression During Sinoatrial Node and Atrial Development
GSE228335	Histone lactylation couples cellular metabolism with the activation of developmental gene regulatory networks [NCC CUT&RUN]
GSE228340	Histone lactylation couples cellular metabolism with the activation of developmental gene regulatory networks [NCC ATAC-seq]
GSE228341	Histone lactylation couples cellular metabolism with the activation of developmental gene regulatory networks [SOX9 MO ATAC-seq]
GSE228342	Histone lactylation couples cellular metabolism with the activation of developmental gene regulatory networks [R-GNE-140 ATAC-seq]
GSE228343	Histone lactylation couples cellular metabolism with the activation of developmental gene regulatory networks
GSE230083	Next generation sequencing of chicken otocyst with genetically induced loss-of-Wnt signalling
GSE230772	Cell-Type Profiling of the Sympathetic Nervous System Using Spatial Transcriptomics and Spatial Mapping of mRNA [RNA-seq]
GSE230776	Cell-Type Profiling of the Sympathetic Nervous System Using Spatial Transcriptomics and Spatial Mapping of mRNA [Slide-seq]
GSE230778	Cell-Type Profiling of the Sympathetic Nervous System Using Spatial Transcriptomics and Spatial Mapping of mRNA [Spatial Transcriptomics]
GSE230780	Cell-Type Profiling of the Sympathetic Nervous System Using Spatial Transcriptomics and Spatial Mapping of mRNA
GSE231492	Dimeric G-quadruplex motifs-induced NFRs determine strong replication origins in vertebrates
GSE236181	Hox gene activity directs physical forces to differentially shape chick small and large intestinal epithelia
GSE240187	Single cell RNA seq analysis of the chicken basilar papilla following in vivo aminoglycoside induced hair cell ablation
GSE241256	Histone lactylation couples cellular metabolism with the activation of developmental gene regulatory networks [CUT&RUN control and SOX9/TEA1-VPR over-expressing]
GSE242458	Single-cell RNA sequencing of the spleen reveals differences in the mechanisms of resistance to bacterial infection between different chicken breeds
GSE248766	Germ cell specific high level of H3K9me3 in chicken PGCs: distribution and role in gene expression control [ChIP-Seq]
GSE248768	Germ cell specific high level of H3K9me3 in chicken PGCs: distribution and role in gene expression control
GSE260533	Hox gene activity directs physical forces to differentially shape chick small and large intestinal epithelia
GSE261503	Limb connective tissue is organized in a continuum of promiscuous fibroblast identities during development
GSE281763	Distinct Gene Regulatory Dynamics Drive Skeletogenic Cell Fate Convergence During Vertebrate Embryogenesis [scATAC]
GSE281769	Distinct Gene Regulatory Dynamics Drive Skeletogenic Cell Fate Convergence During Vertebrate Embryogenesis [scRNA-Seq]
GSE282902	Gene ontology defines pre-post- hatch energy dynamics in the complexus muscle of broiler chickens