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Series GSE135501 Query DataSets for GSE135501
Status Public on Aug 08, 2019
Title Expression data of human peripheral blood leukocytes
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Chronic hepatitis B (CHB) is a huge health burden in China, tongue diagnosis is the premise of personalized treatment of CHB by traditional Chinese medicine(TCM). The modern biological interpretation of pathological TCM tongue coating manifestation is unclear
We performed transcriptional analysis in CHB patients with white tongue coating(WTC) or yellow tongue coating(YTC) to explain the potential inner biological differences
 
Overall design After the experts’ tongue image judgment consistency certification, 16 cases of CHB patients with typical light red tongue and WTC, 24 CHB cases with red tongue and YTC were included. 14 healthy controls with normal tongue manifestation, matched with age and gender, were enrolled as control. The peripheral blood samples were collected by TempusTM Blood RNA Tubes (Thermo Fisher Scientific), Affymetrix Human Genome U219 Array plates were used. The quality control data was normalized by the RMA algorithm using Gene Spring Software 11.5 (Agilent). Biological information analysis of DEGs using Ingenuity Pathways Analysis (IPA, Ingenuity systems, Inc., Redwood City, CA, www.ingenuity.com).
 
Contributor(s) Hu Y, Zhao Y
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Submission date Aug 07, 2019
Last update date Aug 10, 2019
Contact name Yu Zhao
E-mail(s) [email protected]
Organization name Shuguang Hospital affiliated to Shanghai University of Traditional Chinese Medicine
Street address NO528 Zhangheng Road, Pudong district
City Shanghai
ZIP/Postal code 201203
Country China
 
Platforms (1)
GPL13667 [HG-U219] Affymetrix Human Genome U219 Array
Samples (55)
GSM4013120 B0005 CHB WTC
GSM4013121 B0011 CHB YTC
GSM4013122 B0012 CHB YTC
Relations
BioProject PRJNA559104

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE135501_RAW.tar 113.8 Mb (http)(custom) TAR (of CEL)
GSE135501_nor_data.txt.gz 8.6 Mb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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