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Series GSE177689 Query DataSets for GSE177689
Status Public on Sep 15, 2021
Title Human blastoids model blastocyst development and implantation
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary About one week after fertilization, human embryos implant into the uterus. This necessitates the formation of a blastocyst consisting of a sphere encircling a cavity lodging the embryo proper. Stem cells can form a blastocyst model, which we termed blastoid. Here we show that naive human pluripotent stem cells (PXGL hPSCs) efficiently (>70%) form blastoids generating blastocyst-stage analogs of the 3 founding lineages (>97% trophectoderm, epiblast, and primitive endoderm) according to the sequence and to the pace of blastocyst development. Blastoids form the first axis and we observe that the epiblast induces the maturation of the polar trophectoderm that consequently acquires the specific and transient potential to attach to hormonally-stimulated endometrial cells. Such human blastoids are faithful, scalable, versatile, and ethical models to explore human implantation and development.
 
Overall design Refer to individual Series
 
Citation(s) 34856602
Submission date Jun 12, 2021
Last update date Dec 15, 2021
Contact name Giovanni Sestini
Organization name IMBA - Institute of Molecular Biotechnology
Street address Dr.-Bohr-Gasse 3, 1030 Wien
City Vienna
ZIP/Postal code 1030
Country Austria
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (2776)
GSM5375527 primed H9-150182
GSM5375528 primed H9-150183
GSM5375529 primed H9-150185
This SuperSeries is composed of the following SubSeries:
GSE177616 Human blastoids model blastocyst development and implantation [scRNAseq]
GSE179040 Human blastoids model blastocyst development and implantation [Bulk RNA-seq]
Relations
BioProject PRJNA737139

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE177689_RAW.tar 462.7 Mb (http)(custom) TAR (of TXT)
GSE177689_blastoid.H9.okae_bts5__scRNAseq.unfiltered__counts.RDS.gz 41.6 Mb (ftp)(http) RDS
GSE177689_blastoid.H9.okae_bts5__scRNAseq.unfiltered__metadata.tsv.gz 49.7 Kb (ftp)(http) TSV
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