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Series GSE20639 Query DataSets for GSE20639
Status Public on Mar 06, 2010
Title Gene expression profiles of adult renal capsule isolated from kidneys using micro-dissection. (GUDMAP Series ID: 36)
Organism Mus musculus
Experiment type Expression profiling by array
Summary The long term objective is to create an encyclopedia of the expression levels of all genes in multiple components of the developing kidney. The central thesis is straightforward. The combination of fluorescent activated cell sorting (FACS) plus microarray analysis offers a powerful, efficient and effective method for the creation of a global gene expression atlas of the developing kidney. Microarrays with essentially complete genome coverage can be used to quantitate expression levels of every gene in FACS isolated components of the developing kidney. The ensuing rapid read-out provides an expression atlas that is more sensitive, more economical and more complete than would be possible by in situ hybridizations alone.
 
Overall design CD-1 mice were utilized to isolate the capsule cells from the adult kidneys. The capsule cells were isolated from the kidney using microdissection treatment. RNA was isolated and the gene expression profiles were determined by microarrays.
Web link http://www.gudmap.org
 
Contributor(s) Potter S, Brunskill E
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Submission date Mar 05, 2010
Last update date Mar 04, 2019
Contact name GUDMAP Developers
E-mail(s) [email protected]
Phone +44 131 651 8500
Organization name IGMM MRC Human Genetics Unit
Lab GUDMAP Database Group
Street address Crewe Road
City Edinburgh
ZIP/Postal code EH4 2XU
Country United Kingdom
 
Platforms (1)
GPL6246 [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version]
Samples (3)
GSM518312 Adult_Capsule_2
GSM518313 Adult_Capsule_3
GSM518314 Adult_Capsule_4
Relations
BioProject PRJNA124861

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE20639_RAW.tar 13.7 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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