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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001321102.2 → NP_001308031.1 trafficking protein particle complex subunit 12
Status: VALIDATED
- Source sequence(s)
-
AC114810, AK098327
- Consensus CDS
-
CCDS1652.1
- UniProtKB/Swiss-Prot
- B3KV01, D6W4Y2, Q8WVT3, Q8WVW1, Q9Y395
- UniProtKB/TrEMBL
-
Q8N9N0
- Related
- ENSP00000371544.2, ENST00000382110.6
- Conserved Domains (4) summary
-
- sd00006
Location:546 → 573
- TPR; TPR repeat [structural motif]
- pfam11035
Location:61 → 134
- SnAPC_2_like; Small nuclear RNA activating complex subunit 2, SNAP190 Myb
- pfam13414
Location:622 → 685
- TPR_11; TPR repeat
- pfam13424
Location:581 → 652
- TPR_12; Tetratricopeptide repeat
-
NM_016030.6 → NP_057114.5 trafficking protein particle complex subunit 12
See identical proteins and their annotated locations for NP_057114.5
Status: VALIDATED
- Source sequence(s)
-
AF151845, BC014164, BC017475, DA031172
- Consensus CDS
-
CCDS1652.1
- UniProtKB/Swiss-Prot
- B3KV01, D6W4Y2, Q8WVT3, Q8WVW1, Q9Y395
- UniProtKB/TrEMBL
-
Q8N9N0
- Related
- ENSP00000324318.5, ENST00000324266.10
- Conserved Domains (4) summary
-
- sd00006
Location:546 → 573
- TPR; TPR repeat [structural motif]
- pfam11035
Location:61 → 134
- SnAPC_2_like; Small nuclear RNA activating complex subunit 2, SNAP190 Myb
- pfam13414
Location:622 → 685
- TPR_11; TPR repeat
- pfam13424
Location:581 → 652
- TPR_12; Tetratricopeptide repeat
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000002.12 Reference GRCh38.p14 Primary Assembly
- Range
-
3379694..3479565
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011510350.3 → XP_011508652.1 trafficking protein particle complex subunit 12 isoform X1
- UniProtKB/TrEMBL
-
Q8N9N0
- Conserved Domains (4) summary
-
- sd00006
Location:508 → 535
- TPR; TPR repeat [structural motif]
- pfam11035
Location:61 → 134
- SnAPC_2_like; Small nuclear RNA activating complex subunit 2, SNAP190 Myb
- pfam13414
Location:584 → 647
- TPR_11; TPR repeat
- pfam13424
Location:543 → 614
- TPR_12; Tetratricopeptide repeat
-
XM_047444637.1 → XP_047300593.1 trafficking protein particle complex subunit 12 isoform X1
- UniProtKB/TrEMBL
-
Q8N9N0
-
XM_011510352.3 → XP_011508654.1 trafficking protein particle complex subunit 12 isoform X2
- Conserved Domains (1) summary
-
- pfam11035
Location:61 → 134
- SnAPC_2_like; Small nuclear RNA activating complex subunit 2, SNAP190 Myb
-
XM_047444639.1 → XP_047300595.1 trafficking protein particle complex subunit 12 isoform X3
-
XM_047444638.1 → XP_047300594.1 trafficking protein particle complex subunit 12 isoform X2
-
XM_011510353.3 → XP_011508655.1 trafficking protein particle complex subunit 12 isoform X4
- Conserved Domains (1) summary
-
- pfam11035
Location:61 → 134
- SnAPC_2_like; Small nuclear RNA activating complex subunit 2, SNAP190 Myb
-
XM_011510354.3 → XP_011508656.1 trafficking protein particle complex subunit 12 isoform X5
- Conserved Domains (1) summary
-
- pfam11035
Location:61 → 134
- SnAPC_2_like; Small nuclear RNA activating complex subunit 2, SNAP190 Myb
-
XM_011510355.3 → XP_011508657.1 trafficking protein particle complex subunit 12 isoform X6
- UniProtKB/TrEMBL
-
Q53QD4
- Conserved Domains (4) summary
-
- TIGR02795
Location:234 → 293
- tol_pal_ybgF; tol-pal system protein YbgF
- sd00006
Location:231 → 258
- TPR; TPR repeat [structural motif]
- pfam13414
Location:307 → 370
- TPR_11; TPR repeat
- pfam13424
Location:266 → 337
- TPR_12; Tetratricopeptide repeat
-
XM_011510356.2 → XP_011508658.1 trafficking protein particle complex subunit 12 isoform X7
See identical proteins and their annotated locations for XP_011508658.1
- UniProtKB/TrEMBL
- A0A0J9YXQ9, Q53QD4
- Conserved Domains (3) summary
-
- sd00006
Location:190 → 217
- TPR; TPR repeat [structural motif]
- cl26002
Location:199 → 379
- TPR_11; TPR repeat
- cl26250
Location:193 → 252
- TPR_6; Tetratricopeptide repeat
RNA
-
XR_426956.4 RNA Sequence
-
XR_007076381.1 RNA Sequence
-
XR_001738761.2 RNA Sequence
-
XR_007076382.1 RNA Sequence
Reference GRCh38.p14 ALT_REF_LOCI_1
Genomic
-
NT_187522.1 Reference GRCh38.p14 ALT_REF_LOCI_1
- Range
-
9876..89035
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060926.1 Alternate T2T-CHM13v2.0
- Range
-
3401815..3501615
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054342395.1 → XP_054198370.1 trafficking protein particle complex subunit 12 isoform X1
- UniProtKB/TrEMBL
-
Q8N9N0
-
XM_054342396.1 → XP_054198371.1 trafficking protein particle complex subunit 12 isoform X1
- UniProtKB/TrEMBL
-
Q8N9N0
-
XM_054342397.1 → XP_054198372.1 trafficking protein particle complex subunit 12 isoform X2
-
XM_054342399.1 → XP_054198374.1 trafficking protein particle complex subunit 12 isoform X3
-
XM_054342398.1 → XP_054198373.1 trafficking protein particle complex subunit 12 isoform X2
-
XM_054342400.1 → XP_054198375.1 trafficking protein particle complex subunit 12 isoform X4
-
XM_054342401.1 → XP_054198376.1 trafficking protein particle complex subunit 12 isoform X5
-
XM_054342403.1 → XP_054198378.1 trafficking protein particle complex subunit 12 isoform X7
- UniProtKB/TrEMBL
- A0A0J9YXQ9, Q53QD4
-
XM_054342402.1 → XP_054198377.1 trafficking protein particle complex subunit 12 isoform X6
- UniProtKB/TrEMBL
-
Q53QD4
RNA
-
XR_008486387.1 RNA Sequence
-
XR_008486386.1 RNA Sequence
-
XR_008486385.1 RNA Sequence
-
XR_008486388.1 RNA Sequence