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Platform GPL4057 Query DataSets for GPL4057
Status Public on Aug 04, 2006
Title PHRI-UMNDJ Mycobacterium tuberculosis 4.8K CAG_Mtb
Technology type spotted oligonucleotide
Distribution non-commercial
Organism Mycobacterium tuberculosis
Manufacturer Center for Applied Genomics
Manufacture protocol Oligonucleotide 70mer long from the OPERON TB set version 1.0 are spotted using an omnigrid arrayer at a concentration of 25uM in 3x SSC onto glass slides coated with Poly-L-Lysine.
Support glass
Coating polysine
 
 
Contributor(s) Soteropoulos P, Ghanny SS, Aris VM
Submission date Aug 02, 2006
Last update date Aug 04, 2006
Contact name Virginie Marie Aris
E-mail(s) [email protected]
Phone 973-854-3455
Fax 973-854-3453
URL http://www.cag.icph.org/
Organization name PHRI-UMNDJ
Department Center For Applied Genomics
Lab Soteropoulos
Street address W420M, 225 Warren St
City Newark
State/province NJ
ZIP/Postal code 07103
Country USA
 
Samples (287) GSM135563, GSM135570, GSM135571, GSM135574, GSM135578, GSM135584 
Series (25)
GSE5815 furB knockout
GSE6209 The global transcriptional profile of Mycobacterium tuberculosis during human macrophages infection
GSE6750 Complex interactions of stress-associated regulons in an mprAB deletion mutant of Mycobacterium tuberculosis

Data table header descriptions
ID
Rv-ORF_ID Rv or ORF number
Name Gene name
ORF
SPOT_ID

Data table
ID Rv-ORF_ID Name ORF SPOT_ID
010101 Rv0098 Rv0098 Rv0098
010102 Rv0100 Rv0100 Rv0100
010103 Rv0102 Rv0102 Rv0102
010104 Rv0104 Rv0104 Rv0104
010105 Rv0106 Rv0106 Rv0106
010106 Rv0108c Rv0108c Rv0108c
010107 Rv0122 Rv0122 Rv0122
010108 Rv0124 PE_PGRS Rv0124
010109 Rv0126 Rv0126 Rv0126
010110 Rv0128 Rv0128 Rv0128
010111 Rv0130 Rv0130 Rv0130
010112 Rv0132c Rv0132c Rv0132c
010113 Rv0146 Rv0146 Rv0146
010114 Rv0148 Rv0148 Rv0148
010115 Rv0150c Rv0150c Rv0150c
010201 Rv0152c PE Rv0152c
010202 Rv0154c fadE2 Rv0154c
010203 Rv0156 pntAB Rv0156
010204 Rv0170 Rv0170 Rv0170
010205 Rv0172 Rv0172 Rv0172

Total number of rows: 4800

Table truncated, full table size 145 Kbytes.






Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary data files not provided

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