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Status
Public on Dec 31, 2016
Title
Agilent-048771 4x44K Grape all [Probe Name version]
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Vitis vinifera Manufacturer
Agilent Technologies
Manufacture protocol
see manufacturer's web site at http://www.agilent.com/
Description
Arrays of this design have barcodes that begin with 16048771 or 2548771.http://genomes.cribi.unipd.it/grape/
Submission date
Sep 13, 2016
Last update date
Dec 31, 2016
Contact name
Alessandra Amato
E-mail(s)
[email protected] Organization name
University of Verona
Street address
strada le grazie 15
City
VR
ZIP/Postal code
37134
Country
Italy
Samples (141)
GSM2309987 , GSM2309988 , GSM2309989 , GSM2309990 , GSM2309991 , GSM2309992
GSM3100523 ,
GSM3100524 ,
GSM3100525 ,
GSM3100526 ,
GSM3100527 ,
GSM3100528 ,
GSM3100529 ,
GSM3100530 ,
GSM3100531 ,
GSM3100532 ,
GSM3100533 ,
GSM3100534 ,
GSM3100535 ,
GSM3100536 ,
GSM3100537 ,
GSM3100538 ,
GSM3259664 ,
GSM3259665 ,
GSM3259666 ,
GSM3259667 ,
GSM3259668 ,
GSM3259669 ,
GSM3259670 ,
GSM3259671 ,
GSM3259672 ,
GSM3259673 ,
GSM3259674 ,
GSM3259675 ,
GSM3259676 ,
GSM3259677 ,
GSM3259678 ,
GSM4694013 ,
GSM4694014 ,
GSM4694015 ,
GSM4694016 ,
GSM4694017 ,
GSM4694018 ,
GSM4694019 ,
GSM4694020 ,
GSM4724767 ,
GSM4724768 ,
GSM4724769 ,
GSM4724770 ,
GSM4724771 ,
GSM4724772 ,
GSM5615503 ,
GSM5615504 ,
GSM5615505 ,
GSM5615506 ,
GSM5615507 ,
GSM5615508 ,
GSM5615509 ,
GSM5615510 ,
GSM5615511 ,
GSM5615512 ,
GSM5615513 ,
GSM5615514 ,
GSM5615515 ,
GSM5615516 ,
GSM7316680 ,
GSM7316681 ,
GSM7316682 ,
GSM7316683 ,
GSM7316684 ,
GSM7316685 ,
GSM8037403 ,
GSM8037404 ,
GSM8037405 ,
GSM8037406 ,
GSM8037407 ,
GSM8037408 ,
GSM8037409 ,
GSM8037410 ,
GSM8037411 ,
GSM8037412 ,
GSM8037413 ,
GSM8037414 ,
GSM8037415 ,
GSM8037416 ,
GSM8037417 ,
GSM8037418 ,
GSM8037419 ,
GSM8037420 ,
GSM8037421 ,
GSM8037422 ,
GSM8037423 ,
GSM8037424 ,
GSM8037425 ,
GSM8037426 ,
GSM8037427 ,
GSM8037428 ,
GSM8037429 ,
GSM8037430 ,
GSM8037431 ,
GSM8037432 ,
GSM8037433 ,
GSM8037434 ,
GSM8037435 ,
GSM8037436 ,
GSM8037437 ,
GSM8037438 ,
GSM8037439 ,
GSM8037440 ,
GSM8037441 ,
GSM8037442 ,
GSM8037443 ,
GSM8037444 ,
GSM8037445 ,
GSM8037446 ,
GSM8037447 ,
GSM8037448 ,
GSM8037449 ,
GSM8037450 ,
GSM8037451 ,
GSM8037452 ,
GSM8037453 ,
GSM8037454 ,
GSM8037455 ,
GSM8037456 ,
GSM8037457 ,
GSM8037458 ,
GSM8037459 ,
GSM8037460 ,
GSM8037461 ,
GSM8037462 ,
GSM8037463 ,
GSM8037464 ,
GSM8037465 ,
GSM8037466 ,
GSM8037467 ,
GSM8037468 ,
GSM8037469 ,
GSM8037470 ,
GSM8037471 ,
GSM8037472 Series (14)
GSE86891 Functional characterization of a WRKY transcription factor involved in the regulation of vacuolar transport and flavonoid biosynthesis in grapevine
GSE86892 Functional characterization of a WRKY transcription factor involved in the regulation of vacuolar transport and flavonoid biosynthesis
GSE113223 Timing and order of the molecular events marking the onset of berry ripening in grapevine [WRKY19 OE]
GSE113224 Timing and order of the molecular events marking the onset of berry ripening in grapevine [BHLH OE]
GSE113225 Timing and order of the molecular events marking the onset of berry ripening in grapevine
GSE116740 Whole-transcriptome microarray analysis of grapevine-Botrytis cinerea interaction during latent infection of berries (“noble rot”)
GSE116741 Whole-transcriptome analysis of grapevine-Botrytis cinerea interaction during latent infection of berries
GSE155037 The VviNAC33 acts a molecular switch by activating leaf degreening and repressing vegetative growth during the immature-to-mature phase transition in grapevine
GSE156105 The VviNAC33 acts as a molecular switch by activating leaf degreening and repressing vegetative growth during the immature-to-mature phase transition in grapevine
GSE185447 Initiation of organ maturation and fruit ripening in grapevine is controlled by the CARPO-NAC transcription factor [Sultana]
GSE185448 Initiation of organ maturation and fruit ripening in grapevine is controlled by the CARPO-NAC transcription factor [Syrah]
GSE185449 Initiation of organ maturation and fruit ripening in grapevine is controlled by the CARPO-NAC transcription factor
GSE232165 NAC61 regulates late- and post-ripening osmotic, oxidative, and biotic stress responses in grapevine
GSE254304 Spatial Variability of Grape Berry Maturation Program at the Molecular Level
Data table header descriptions ID Probe name
SPOT_ID CONTROL_TYPE Control type
ACCESSION_STRING Accession String
CHROMOSOMAL_LOCATION Chromosomal Location
SEQUENCE Sequence
Data table ID SPOT_ID CONTROL_TYPE ACCESSION_STRING CHROMOSOMAL_LOCATION SEQUENCE GE_BrightCorner
GE_BrightCorner
pos
DarkCorner
DarkCorner
pos
CUST_7355_PI428914343
CUST_7355_PI428914343
FALSE
VIT_05s0094g00170
unmapped
TTCTCTCGCCTGCAACTCTCCCTATCCAGAAAATCATTCTTTCAGTCATCAGAAATGGTT
CUST_784_PI428914343
CUST_784_PI428914343
FALSE
VIT_09s0002g08760
unmapped
GATCTTGCGTGGGCTACTTTTAGGAAGGTACCACAACGAAGTTATAAGATGGCTTTCTAG
CUST_18262_PI428914343
CUST_18262_PI428914343
FALSE
VIT_15s0046g00730
unmapped
ATGAGGAAGTCAGAGAAGCTCAATGAGAACCCAGCCTTCCAAATGAATCCTGTCATGTAA
CUST_19171_PI428914343
CUST_19171_PI428914343
FALSE
VIT_14s0036g00020
unmapped
CCAGAAGTTCTTTATAGAGGATCCTAGATTTCTTTGTTTCACCCTATCGCAGTTGAACTT
CUST_31055_PI428914343
CUST_31055_PI428914343
FALSE
XLOC_006232
unmapped
AATCAATTGACTCAACTGAGTGACAGTTACACCTTCCTTCACATTCACATTTGTCCCTTC
CUST_3450_PI428914343
CUST_3450_PI428914343
FALSE
VIT_07s0005g01500
unmapped
CTCATTGTTGGGTGGAAAGGAACTCCTATTCATTCCCTTTCAGCGTGGAAATTCACCTGA
CUST_5532_PI428914343
CUST_5532_PI428914343
FALSE
VIT_06s0009g02760
unmapped
TGTCTCTTCGGAGACATCCGATAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCT
CUST_10504_PI428914343
CUST_10504_PI428914343
FALSE
VIT_02s0025g02250
unmapped
CATGAGTTTGTGGATCAAAAACAAAAGTACTCTGTAGCTTCTTTCAATCGAGAACAAACT
CUST_1746_PI428914343
CUST_1746_PI428914343
FALSE
VIT_08s0058g01480
unmapped
GTTGGTCTGTCTATGAACATAAAAATGGGTTATACCCAATTGCAGATTGATGTTTACAGT
CUST_27943_PI428914343
CUST_27943_PI428914343
FALSE
VIT_00s0229g00040
unmapped
CCCACACACTTGTATTCACTGTGTAACAAAAATGAGCTGTTTGTGGGCATTGGTTGTTAG
CUST_29454_PI428914343
CUST_29454_PI428914343
FALSE
VIT_00s1338g00020
unmapped
TTATTGTTATCTACTTCCAAGGATTCCGGGTGGTTTTGCCTGTGCGGTCAAAGAATGCTC
CUST_15407_PI428914343
CUST_15407_PI428914343
FALSE
VIT_17s0000g04250
unmapped
GAGAGAATGCTAACTAGAAGAGAGGGAGATATGGCCTTTAAATTATTAGTGTTATGGCGA
CUST_12099_PI428914343
CUST_12099_PI428914343
FALSE
VIT_19s0015g00290
unmapped
GCTTCTTCCACTGGAGTTGTATTTACTTCTATCTCTTTCAAAGTGGATTATGCTTTTAAG
CUST_33687_PI428914343
CUST_33687_PI428914343
FALSE
XLOC_020215
unmapped
AAATCCCAACCCAATCAACCAAAGAGAGAGAGAGTCATCAATGTGACGAGAGAGCATGGA
CUST_10834_PI428914343
CUST_10834_PI428914343
FALSE
VIT_02s0154g00250
unmapped
CTTGTATTTTCTTTCTTTCCCCCACCCACCTTTTCGTTGGAAATAAATGAAAGAGATAAA
CUST_587_PI428914343
CUST_587_PI428914343
FALSE
VIT_09s0002g06350
unmapped
ATGGTCATCCACCATCTTTCTTTAATGCGCAACAAGCGCTGCCTTATGGCATATGTGTAA
CUST_29977_PI428914343
CUST_29977_PI428914343
FALSE
XLOC_001115
unmapped
GATGATGAAAATGGTAGCTGGTCATATCTAAATGTCAGATTCAGGGTTCATTCTAATTTC
CUST_11101_PI428914343
CUST_11101_PI428914343
FALSE
VIT_02s0012g02460
unmapped
GGTTGAGGCCATGACATCCTTCAATTTTTTAACCTTGCTTATTTGTATGACATTGTTGAT
34429 4651 Kbytes .Supplementary file Size Download File type/resource GPL22427_048771_D_GEO_20130410.txt.gz
1.4 Mb
(ftp) (http) TXT
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