|
| Status |
Public on Dec 15, 2017 |
| Title |
Runx3 programs CD8+ T cell residency in non-lymphoid tissues and tumours |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
Expression profiling by array
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
29211713 |
| |
| Submission date |
Nov 27, 2017 |
| Last update date |
Aug 28, 2020 |
| Contact name |
John Justin Milner |
| E-mail(s) |
[email protected]
|
| Organization name |
UCSD
|
| Lab |
Goldrath Lab
|
| Street address |
9500 Gilman Dr. MC0377
|
| City |
La Jolla |
| State/province |
CA |
| ZIP/Postal code |
92093 |
| Country |
USA |
| |
|
| Platforms (2) |
| GPL6246 |
[MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version] |
| GPL17021 |
Illumina HiSeq 2500 (Mus musculus) |
|
| Samples (44)
|
|
| This SuperSeries is composed of the following SubSeries:
|
| GSE106107 |
RNA-Seq of CD8+ T cells expressing different levels of Runx3 in a cell culture model of CTL differentiation |
| GSE107278 |
Microarray analysis of CD8+ T cell subsets during LCMV infection |
| GSE107281 |
RNA-Seq of CD8+ T cell subsets during LCMV infection |
| GSE107289 |
RNA-seq of tumor residing CD8+ T cells overexpressing Runx3 |
| GSE107373 |
ATAC-Seq of CD8+ T cell subsets during LCMV infection |
| GSE108092 |
ATAC-Seq of CD8+ T cell terminal effector and memory precursor subsets during LCMV infection |
|
| Relations |
| BioProject |
PRJNA419960 |
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