GEO DataSets

Analysis of livers from male FVB animals fasting for up to 72 hours. Results provide insight into the adaptive response of the liver to fasting.

Organism:

Mus musculus

Type:

Expression profiling by array, log ratio, 4 time sets

Platform:

GPL922

Series:

GSE10653

12 Samples

Download data: TIFF, TXT

Comparison of monocytes and macrophages. Samples obtained from 86 patients with acute coronary syndrome. Results used as a reference to compare the performance of Affymetrix (GDS3554) and Illumina (GDS3555) arrays.

Organism:

Homo sapiens

Type:

Expression profiling by array, log ratio, 2 cell type, 48 individual, 2 protocol sets

Platform:

GPL1946

Series:

GSE10220

96 Samples

Download data: GPR

Analysis of liver from obesity-prone (OP) Wistar males with nonalcoholic fatty liver disease (NAFLD) induced by a 16 week, high-fat diet (HFD). Obesity-resistant (OR) males, fed an identical diet, were also examined. Results provide insight into molecular mechanisms underlying NAFLD pathogenesis.

Organism:

Rattus norvegicus

Type:

Expression profiling by array, log ratio, 2 disease state sets

Platform:

GPL4294

Series:

GSE11492

8 Samples

Download data: TXT

Analysis of Caenorhabditis elegans worms 48 hours following treatment with lithium. Chronic lithium treatment increased the lifespan of this organism. Results provide insight into the molecular basis of lithium’s effect on lifespan.

Organism:

Caenorhabditis elegans

Type:

Expression profiling by array, log ratio, 2 agent sets

Platform:

GPL5367

Series:

GSE8058

12 Samples

Download data: GPR

Analysis of leukocytes from patients with gram-positive or gram negative sepsis. Results provide insight into the specificity of the host response to gram-positive and gram negative sepsis.

Organism:

Homo sapiens

Type:

Expression profiling by array, log ratio, 4 disease state sets

Platform:

GPL4274

Series:

GSE6535

72 Samples

Download data: GPR

Analysis of esophagi of animals treated with the carcinogen N-nitrosomethylbenzylamine (NMBA), the chemopreventive agent phenylethyl isothiocyanate (PEITC), or both compounds. Results provide insight into effect of PEITC on the development of NMBA-induced esophageal tumorigenesis.

Organism:

Rattus norvegicus

Type:

Expression profiling by array, log ratio, 4 agent sets

Platform:

GPL2877

Series:

GSE6917

12 Samples

Download data: TXT

Analysis of neutrophils from critically ill patients with sepsis. Results used to define a gene expression signature for sepsis and provides insight into the host response to sepsis.

Organism:

Homo sapiens

Type:

Expression profiling by array, log ratio, 2 disease state, 2 protocol sets

Platform:

GPL4274

Series:

GSE5772

94 Samples

Download data: GPR

Analysis of blood plasma from patients with colorectal cancer. Results used to identify gene markers for colorectal cancer.

Organism:

Homo sapiens

Type:

Expression profiling by array, log ratio, 2 disease state sets

Platform:

GPL3014

Series:

GSE4988

20 Samples

Download data: GPR

Analysis of lymphoblastoid cells from males with autism due to a fragile X mutation or a 15q11-q13 duplication. Results provide insight into the pathogenesis of autism spectrum disorders.

Organism:

Homo sapiens

Type:

Expression profiling by array, log ratio, 2 disease state, 3 genotype/variation sets

Platform:

GPL1708

Series:

GSE7329

30 Samples

Download data: TXT

Analysis of cultured cardiomyocytes treated for up to 24 hours with the flavonoid quercetin. Consumption of food rich in quercetin is correlated with a decreased incidence of heart disease. Results provide insight into the molecular mechanisms underlying the cardioprotective effects of quercetin.

Organism:

Rattus norvegicus

Type:

Expression profiling by array, log ratio, 3 time sets

Platform:

GPL890

Series:

GSE7222

6 Samples

Download data: TIFF, TXT

Analysis of brains of NY1DD transgenic animals treated with naloxone. The NY1DD strain is a model for sickle cell anemia. Naloxone is an opioid antagonist that possesses potent analgesic activity in NY1DD animals. Results provide insight into the mechanism of action of naloxone in this model.

Organism:

Mus musculus

Type:

Expression profiling by array, log ratio, 2 strain sets

Platform:

GPL4464

Series:

GSE6578

6 Samples

Download data: GPS

Analysis of livers of Fisher F344/N males at 32, 58, and 84 weeks of age. Results provide insight into age-associated changes in the capacity of the liver to metabolize xenobiotic compounds.

Organism:

Rattus norvegicus

Type:

Expression profiling by array, log ratio, 3 age sets

Platform:

GPL890

Series:

GSE4270

38 Samples

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Part of a cross comparison of DNA microarray platforms and linear amplification methods. Single round amplified liver, spleen and universal RNA analyzed on a cDNA array.

Organism:

Mus musculus

Type:

Expression profiling by array, log ratio, 2 tissue sets

Platform:

GPL260

Series:

GSE6437

6 Samples

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Part of a cross comparison of DNA microarray platforms and linear amplification methods. Double and single round amplified liver and spleen RNA analyzed on a cDNA array.

Organism:

Mus musculus

Type:

Expression profiling by array, log ratio, 2 protocol sets

Platform:

GPL260

Series:

GSE6438

6 Samples

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Analysis of cells treated with a low dose of caffeine at 2 mM or a high one at 20 mM for 5 , 15, or 90 minutes. Caffeine is a natural purine analogue that elicits pleiotropic effects leading to cell death. Results provide insight into the mechanism of action of caffeine.

Organism:

Saccharomyces cerevisiae

Type:

Expression profiling by array, log ratio, 3 agent, 2 dose, 3 time sets

Platform:

GPL3250

Series:

GSE4049

36 Samples

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Analysis of wild type W303a cells across two cell cycles, a length of 2 hours after synchronization with alpha factor. Gene expression examined at 5-minute intervals.

Organism:

Saccharomyces cerevisiae

Type:

Expression profiling by array, log ratio, 25 time sets

Platform:

GPL1914

Series:

GSE4987

50 Samples

Download data: GPR

Comparison of cells induced to differentiate into dopaminergic neurons by guided differentiation (GD) to those induced to differentiate into embryoid bodies (EBs) by random differentiation (RD). Cells at 3 stages of differentiation in the GD model and days 4 to 21 EBs in the RD model compared.

Organism:

Mus musculus

Type:

Expression profiling by array, log ratio, 7 development stage, 2 growth protocol sets

Platform:

GPL2987

Series:

GSE5459

21 Samples

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Analysis of upper and lower floret anthers at six developmental stages; morphologically, the anthers proceed through the same developmental program. Each array was scanned at multiple intensities. Results reveal enhanced discovery of differentially expressed genes over the single-scan approach.

Organism:

Zea mays

Type:

Expression profiling by array, log ratio, 6 development stage, 12 other sets

Platform:

GPL3021

Series:

GSE3017

24 Samples

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Analysis of upper and lower floret anthers at six developmental stages; morphologically, the anthers proceed through the same developmental program. Each array was scanned at multiple intensities. Results reveal enhanced discovery of differentially expressed genes over the single-scan approach.

Organism:

Zea mays

Type:

Expression profiling by array, log ratio, 6 development stage, 12 other sets

Platform:

GPL3021

Series:

GSE3017

24 Samples

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Analysis of upper and lower floret anthers at six developmental stages; morphologically, the anthers proceed through the same developmental program. Each array was scanned at multiple intensities. Results reveal enhanced discovery of differentially expressed genes over the single-scan approach.

Organism:

Zea mays

Type:

Expression profiling by array, log ratio, 6 development stage, 12 other sets

Platform:

GPL3021

Series:

GSE3017

24 Samples

Download data