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Status
Public on Mar 06, 2003
Title
Caltech 16K cDNA Mouse Array
Technology type
spotted DNA/cDNA
Distribution
non-commercial
Organism
Mus musculus
Description
The 16K mouse cDNAs probes used in this microarray were designed using sequence information gathered from RIKEN FANTOM cDNA library. Probes can be 0.5 to 3 kb in length where about 60% of the probes represent full length transcripts. The PCR products were inkjet-printed on the array by Agilent Technologies (Palo Alto, CA).
Citation(s)
16081620
Submission date
Mar 06, 2003
Last update date
Mar 24, 2006
Contact name
Sangdun Choi
E-mail(s)
[email protected]
Phone
626-395-8732
Fax
626-796-7066
Organization name
California Institute of Technology
Department
Biology
Lab
Simon Lab
Street address
1200 E. California Blvd
City
Pasadena
State/province
CA
ZIP/Postal code
91125
Country
USA
Samples (641)
GSM4656 , GSM4657 , GSM4658 , GSM4659 , GSM4661 , GSM4662
GSM4663 ,
GSM4664 ,
GSM4666 ,
GSM4667 ,
GSM4668 ,
GSM4669 ,
GSM5420 ,
GSM5422 ,
GSM5423 ,
GSM5424 ,
GSM5425 ,
GSM5426 ,
GSM5427 ,
GSM5428 ,
GSM5437 ,
GSM5438 ,
GSM5439 ,
GSM5440 ,
GSM5441 ,
GSM5442 ,
GSM5443 ,
GSM5444 ,
GSM5445 ,
GSM5446 ,
GSM5447 ,
GSM5448 ,
GSM5449 ,
GSM5450 ,
GSM5451 ,
GSM5452 ,
GSM5453 ,
GSM5454 ,
GSM5455 ,
GSM5456 ,
GSM5457 ,
GSM5458 ,
GSM5459 ,
GSM5460 ,
GSM5461 ,
GSM5462 ,
GSM5463 ,
GSM5464 ,
GSM5465 ,
GSM5466 ,
GSM5467 ,
GSM5468 ,
GSM5469 ,
GSM5470 ,
GSM5471 ,
GSM5472 ,
GSM5473 ,
GSM5474 ,
GSM5475 ,
GSM5476 ,
GSM5477 ,
GSM5478 ,
GSM5479 ,
GSM5480 ,
GSM5481 ,
GSM5482 ,
GSM5483 ,
GSM5484 ,
GSM5485 ,
GSM5486 ,
GSM5487 ,
GSM5488 ,
GSM5489 ,
GSM5490 ,
GSM5491 ,
GSM5492 ,
GSM5493 ,
GSM5494 ,
GSM5495 ,
GSM5496 ,
GSM5497 ,
GSM5498 ,
GSM5499 ,
GSM5500 ,
GSM5501 ,
GSM5502 ,
GSM5503 ,
GSM5504 ,
GSM5505 ,
GSM5506 ,
GSM5507 ,
GSM5508 ,
GSM5509 ,
GSM5510 ,
GSM5511 ,
GSM5512 ,
GSM5513 ,
GSM5514 ,
GSM5515 ,
GSM5516 ,
GSM5517 ,
GSM5518 ,
GSM5519 ,
GSM5520 ,
GSM5521 ,
GSM5522 ,
GSM5523 ,
GSM5524 ,
GSM5525 ,
GSM5526 ,
GSM5527 ,
GSM5528 ,
GSM5529 ,
GSM5530 ,
GSM5531 ,
GSM5532 ,
GSM5533 ,
GSM5534 ,
GSM5535 ,
GSM5536 ,
GSM5537 ,
GSM5538 ,
GSM5539 ,
GSM5540 ,
GSM5541 ,
GSM5542 ,
GSM5543 ,
GSM5544 ,
GSM5545 ,
GSM5546 ,
GSM5547 ,
GSM5548 ,
GSM5549 ,
GSM5550 ,
GSM5551 ,
GSM5552 ,
GSM5556 ,
GSM5558 ,
GSM5567 ,
GSM5568 ,
GSM5569 ,
GSM5570 ,
GSM5571 ,
GSM5572 ,
GSM5573 ,
GSM5574 ,
GSM5575 ,
GSM5576 ,
GSM5577 ,
GSM5578 ,
GSM5579 ,
GSM5580 ,
GSM5581 ,
GSM5582 ,
GSM5583 ,
GSM5584 ,
GSM5585 ,
GSM5586 ,
GSM5587 ,
GSM5588 ,
GSM5589 ,
GSM5590 ,
GSM5591 ,
GSM5592 ,
GSM5593 ,
GSM5594 ,
GSM5595 ,
GSM5596 ,
GSM5597 ,
GSM5598 ,
GSM5599 ,
GSM5600 ,
GSM5601 ,
GSM5602 ,
GSM5603 ,
GSM5604 ,
GSM5605 ,
GSM5606 ,
GSM5607 ,
GSM5608 ,
GSM5609 ,
GSM5610 ,
GSM5611 ,
GSM5612 ,
GSM5613 ,
GSM5614 ,
GSM5615 ,
GSM5616 ,
GSM5617 ,
GSM5618 ,
GSM5619 ,
GSM5620 ,
GSM5621 ,
GSM5622 ,
GSM5623 ,
GSM5624 ,
GSM5625 ,
GSM5626 ,
GSM5627 ,
GSM5628 ,
GSM5629 ,
GSM5630 ,
GSM5631 ,
GSM5632 ,
GSM5633 ,
GSM5634 ,
GSM5635 ,
GSM5636 ,
GSM5637 ,
GSM5638 ,
GSM5639 ,
GSM5640 ,
GSM5641 ,
GSM5642 ,
GSM5643 ,
GSM5644 ,
GSM5645 ,
GSM5646 ,
GSM5647 ,
GSM5648 ,
GSM5649 ,
GSM5650 ,
GSM5651 ,
GSM5652 ,
GSM5653 ,
GSM5654 ,
GSM5655 ,
GSM5656 ,
GSM5657 ,
GSM5658 ,
GSM5659 ,
GSM5660 ,
GSM5661 ,
GSM5662 ,
GSM5663 ,
GSM5664 ,
GSM5665 ,
GSM5666 ,
GSM5667 ,
GSM5668 ,
GSM5669 ,
GSM5670 ,
GSM5671 ,
GSM5672 ,
GSM5673 ,
GSM5674 ,
GSM5675 ,
GSM5676 ,
GSM5677 ,
GSM5678 ,
GSM5679 ,
GSM5680 ,
GSM5681 ,
GSM5682 ,
GSM5683 ,
GSM5684 ,
GSM5685 ,
GSM5686 ,
GSM5687 ,
GSM5688 ,
GSM5689 ,
GSM5690 ,
GSM5691 ,
GSM5692 ,
GSM5693 ,
GSM5694 ,
GSM5695 ,
GSM5696 ,
GSM5697 ,
GSM5698 ,
GSM5699 ,
GSM5700 ,
GSM5701 ,
GSM5702 ,
GSM5703 ,
GSM5704 ,
GSM5705 ,
GSM5706 ,
GSM5707 ,
GSM5708 ,
GSM5709 ,
GSM5710 ,
GSM5711 ,
GSM5712 ,
GSM5713 ,
GSM5714 ,
GSM5715 ,
GSM5716 ,
GSM5717 ,
GSM5718 ,
GSM5719 ,
GSM5720 ,
GSM5721 ,
GSM5722 ,
GSM5723 ,
GSM5724 ,
GSM5725 ,
GSM5726 ,
GSM5727 ,
GSM5728 ,
GSM5729 ,
GSM5730 ,
GSM5731 ,
GSM5732 ,
GSM5733 ,
GSM5734 ,
GSM5735 ,
GSM5736 ,
GSM5737 ,
GSM5738 ,
GSM5739 ,
GSM5740 ,
GSM5741 ,
GSM5742 ,
GSM5743 ,
GSM5744 ,
GSM5745 ,
GSM5746 ,
GSM5747 ,
GSM5748 ,
GSM5749 ,
GSM5750 ,
GSM5751 ,
GSM5752 ,
GSM5753 ,
GSM5754 ,
GSM5755 ,
GSM5756 ,
GSM5757 ,
GSM5758 ,
GSM5759 ,
GSM5760 ,
GSM5761 ,
GSM5762 ,
GSM5763 ,
GSM5764 ,
GSM5765 ,
GSM5766 ,
GSM5767 ,
GSM5768 ,
GSM5769 ,
GSM5770 ,
GSM5771 ,
GSM5772 ,
GSM5773 ,
GSM5774 ,
GSM5775 ,
GSM5776 ,
GSM5777 ,
GSM5778 ,
GSM5779 ,
GSM5780 ,
GSM5781 ,
GSM5782 ,
GSM5783 ,
GSM5784 ,
GSM5785 ,
GSM5786 ,
GSM5787 ,
GSM5788 ,
GSM5789 ,
GSM5790 ,
GSM5791 ,
GSM5792 ,
GSM5793 ,
GSM5794 ,
GSM5795 ,
GSM5796 ,
GSM5797 ,
GSM5798 ,
GSM5799 ,
GSM5800 ,
GSM5801 ,
GSM5802 ,
GSM5803 ,
GSM5804 ,
GSM5805 ,
GSM5806 ,
GSM5807 ,
GSM5808 ,
GSM5809 ,
GSM5810 ,
GSM5811 ,
GSM5812 ,
GSM5813 ,
GSM5814 ,
GSM5815 ,
GSM5816 ,
GSM5817 ,
GSM5818 ,
GSM5819 ,
GSM5820 ,
GSM5821 ,
GSM5822 ,
GSM5823 ,
GSM5824 ,
GSM5825 ,
GSM5826 ,
GSM5827 ,
GSM5828 ,
GSM5829 ,
GSM5830 ,
GSM5831 ,
GSM5832 ,
GSM5833 ,
GSM5834 ,
GSM5835 ,
GSM5836 ,
GSM5837 ,
GSM5838 ,
GSM5839 ,
GSM5840 ,
GSM5841 ,
GSM5842 ,
GSM5843 ,
GSM5844 ,
GSM5845 ,
GSM5846 ,
GSM5847 ,
GSM5848 ,
GSM5849 ,
GSM5850 ,
GSM5851 ,
GSM15996 ,
GSM15997 ,
GSM15998 ,
GSM15999 ,
GSM16000 ,
GSM16001 ,
GSM16002 ,
GSM16003 ,
GSM16004 ,
GSM16005 ,
GSM16006 ,
GSM16007 ,
GSM16008 ,
GSM16009 ,
GSM16010 ,
GSM16011 ,
GSM16012 ,
GSM16013 ,
GSM16014 ,
GSM16015 ,
GSM16016 ,
GSM16017 ,
GSM16018 ,
GSM16019 ,
GSM16020 ,
GSM16021 ,
GSM16022 ,
GSM16023 ,
GSM16024 ,
GSM16025 ,
GSM16026 ,
GSM16027 ,
GSM16028 ,
GSM16029 ,
GSM16030 ,
GSM16031 ,
GSM16032 ,
GSM16033 ,
GSM16034 ,
GSM16035 ,
GSM16036 ,
GSM16037 ,
GSM16038 ,
GSM16039 ,
GSM16040 ,
GSM16041 ,
GSM16042 ,
GSM16043 ,
GSM16047 ,
GSM16048 ,
GSM16049 ,
GSM16050 ,
GSM16051 ,
GSM16052 ,
GSM16053 ,
GSM16054 ,
GSM16055 ,
GSM16057 ,
GSM16060 ,
GSM16061 ,
GSM16062 ,
GSM16063 ,
GSM16064 ,
GSM16065 ,
GSM16066 ,
GSM16067 ,
GSM16068 ,
GSM16069 ,
GSM16070 ,
GSM16071 ,
GSM16072 ,
GSM16073 ,
GSM16074 ,
GSM16075 ,
GSM16076 ,
GSM16077 ,
GSM16078 ...
Accession list truncated, click here to browse through all related public accessions You can also download a list of all accessions here
Series (48)
GSE330
Spleen vs Liver - cDNA - Single
GSE331
Spleen vs Liver - cDNA - Double
GSE332
UMRR vs Spleen
GSE333
UMRR vs Liver
GSE370
Spleen vs 2-Methyl-thio-ATP Treated B cell
GSE371
Spleen vs Anti-IgM Treated B cell
GSE372
Spleen vs BAFF Treated B cell
GSE373
Spleen vs BLC Treated B cell
GSE374
Spleen vs Bombesin Treated B cell
GSE375
Spleen vs CD27 Treated B cell
GSE376
Spleen vs CD40 Treated B cell
GSE377
Spleen vs CGS Treated B cell
GSE378
Spleen vs CpG-oligodeoxynucleotide Treated B cell
GSE379
Spleen vs Dimaprit Treated B cell
GSE380
Spleen vs ELC Treated B cell
GSE381
Spleen vs fMLP Treated B cell
GSE382
Spleen vs GHRH Treated B cell
GSE383
Spleen vs IFN beta Treated B cell
GSE384
Spleen vs IFN gamma Treated B cell
GSE385
Spleen vs Insulin-like growth factor 1 gamma Treated B cell
GSE386
Spleen vs IL4 Treated B cell
GSE387
Spleen vs IL10 Treated B cell
GSE388
Spleen vs Lysophosphatidic Acid Treated B cell
GSE389
Spleen vs Lipopolysaccharide (LPS) Treated B cell
GSE390
Spleen vs Leukotriene B4 (LTB4) Treated B cell
GSE391
Spleen vs MIP3-alpha Treated B cell
GSE392
Spleen vs NGF (Nerve Growth Factor) Treated B cell
GSE393
Spleen vs Neuropeptide Y Treated B cell
GSE394
Spleen vs Platelet activating factor Treated B cell
GSE395
Spleen vs Prostaglandin E2 Treated B cell
GSE396
Spleen vs Sphingosine-1-phosphate Treated B cell
GSE397
Spleen vs SDF1 alpha (Stromal cell derived factor-1) Treated B cell
GSE398
Spleen vs SLC (Secondary lymphoid-organ chemokine) Treated B cell
GSE399
Spleen vs Terbutaline Treated B cell
GSE400
Spleen vs TGF-beta (transforming growth factor-beta) Treated B cell
GSE401
Spleen vs Tumor necrosis factor-alpha Treated B cell
GSE402
Spleen vs Untreated, cultured B cell
GSE1014
B cell response to CD40, Anti-IgM, ELC, IL4, terbutaline and lipopolysaccharide treatment
GSE1019
B cell response to Anti-IgM and CD40 treatment
GSE1020
B cell response to Anti-IgM and ELC treatment
GSE1021
B cell response to Anti-IgM and terbutaline treatment
GSE1022
B cell response to CD40 and lipopolysaccharide treatment
GSE1023
B cell response to CD40 and IL4 treatment
GSE1024
B cell response to ELC and lipopolysaccharide treatment
GSE2050
Major Patterns of B Cell Gene Expression Changes in Response to Short-Term Stimulation with 33 Single Ligands
GSE2464
Spleen vs Neurokinin B (NEB) Treated B cell
GSE6437
UMRR vs Liver or Spleen
GSE6438
Spleen vs Liver - cDNA - Single and Double
Data table header descriptions
ID
Feature number which corresponds to the order of genes on the array
ROW
Row-within array
COLUMN
Column-within array
UNIGENE
UniGene ID
CONTROL_TYPE
Designate place holders on the array
GENE
Gene Name
GB_ACC
GenBank Accession number
SPOT_ID
Data table
ID
ROW
COLUMN
UNIGENE
CONTROL_TYPE
GENE
GB_ACC
SPOT_ID
1
1
1
1
Fiducial
Fiducial
2
1
2
1
Agilent QC
Agilent QC
3
1
3
-20000
Agilent_BLANK
Agilent_BLANK
4
1
4
1
Agilent QC
Agilent QC
5
1
5
-20000
Agilent_BLANK
Agilent_BLANK
6
1
6
1
Agilent QC
Agilent QC
7
1
7
-20000
Agilent_BLANK
Agilent_BLANK
8
1
8
41415
0
ActA binding protein 3
AK014712
9
1
9
22435
0
golgi phosphoprotein 3
AK014644
10
1
10
140158
0
cytochrome P450, 51
NM_020010
11
1
11
78551
0
testis expressed gene 21
AK016448
12
1
12
34044
0
decay accelerating factor 2
AK019553
13
1
13
4379
0
pericentrin
AK015109
14
1
14
22891
0
coatomer protein complex, subunit gamma 2, antisense 2
AK018238
15
1
15
20950
0
DEAD (aspartate-glutamate-alanine-aspartate) box polypeptide, Y chromosome
AK020213
16
1
16
1011
0
nuclear receptor coactivator 3
AK021229
17
1
17
4078
0
antigen identified by monoclonal antibody Ki 67
X82786
18
1
18
116904
0
solute carrier family 26, member 3
AK018566
19
1
19
23834
0
ESTs, Weakly similar to AF144731 1 putative splicing factor YT521-B [R.norvegicus]
BF681837
20
1
20
22478
0
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily f, member 1
AK003972
Total number of rows: 16273 Table truncated, full table size 894 Kbytes .
Supplementary data files not provided