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GEO help: Mouse over screen elements for information. |
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Status |
Public on Mar 20, 2009 |
Title |
Characterization of microRNA expression in colorectal cancer |
Platform organisms |
Homo sapiens; Mus musculus; Rattus norvegicus |
Sample organism |
Homo sapiens |
Experiment type |
Non-coding RNA profiling by array
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Summary |
MiRNAs have differential expression between normal colon and cancer tissues, and could be targets for CRC therapies and be further developed as potential diagnostic and prognostic analytes. Keywords: classification
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Overall design |
66 samples from 49 patients
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Citation(s) |
19843336 |
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Submission date |
Jan 24, 2008 |
Last update date |
Mar 19, 2012 |
Contact name |
Jack Yu |
E-mail(s) |
[email protected]
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Phone |
858-320-3362
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Fax |
858-784-3182
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Organization name |
Veridex, LLC
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Street address |
3210 Merryfield Row
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City |
San Diego |
State/province |
CA |
ZIP/Postal code |
92121 |
Country |
USA |
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Platforms (1) |
GPL4411 |
Ambion Human_Mouse_Rat mirVANA miRNA Bioarray_1566V1 |
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Samples (66)
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GSM259102 |
FFPE-Duke B, Cancer, Sample KDSZBANI, Chip R38365 |
GSM259103 |
Duke B, Cancer, Sample KDSZBANI, Chip R38366 |
GSM259104 |
FFPE-Duke C, Cancer, Sample ZIPBBA2E, Chip R38367 |
GSM259105 |
Duke C, Cancer, Sample ZIPBBA2E, Chip R38368 |
GSM259106 |
FFPE-Duke D, Cancer, Sample IJNQZAQZ, Chip R38369 |
GSM259107 |
Duke D, Cancer, Sample IJNQZAQZ, Chip R38370 |
GSM259108 |
FFPE-Duke C, Cancer, Sample FQFE7A5W, Chip R38371 |
GSM259109 |
Duke C, Cancer, Sample FQFE7A5W, Chip R38372 |
GSM259110 |
Normal, Cancer, Sample ELMC6NHB, Chip R38373 |
GSM259111 |
Duke A, Cancer, Sample C109, Chip R38374 |
GSM259112 |
Duke B, Cancer, Sample 9S9RNA14, Chip R38375 |
GSM259113 |
Duke B, Cancer, Sample ACGL2AN4, Chip R38376 |
GSM259114 |
Duke B, Cancer, Sample TUUKWA2Q, Chip R38377 |
GSM259115 |
Duke B, Cancer, Sample KKFKYAIU, Chip R38378 |
GSM259116 |
Duke B, Cancer, Sample B7AYIA8V, Chip R38379 |
GSM259117 |
Duke B, Cancer, Sample FNJUHAU3, Chip R38380 |
GSM259118 |
Duke C, Cancer, Sample B8TMKAN5, Chip R38381 |
GSM259119 |
Duke C, Cancer, Sample HQIU5AYO, Chip R38382 |
GSM259120 |
Duke C, Cancer, Sample HIKQCAAS, Chip R38383 |
GSM259121 |
Duke C, Cancer, Sample NN29GABN, Chip R38384 |
GSM259122 |
Duke C, Cancer, Sample DFVJAACX, Chip R38385 |
GSM259123 |
Duke C, Cancer, Sample 9VMYRAAB, Chip R38386 |
GSM259124 |
Duke C, Cancer, Sample BDGFCAKA, Chip R38387 |
GSM259125 |
Duke C, Cancer, Sample ELMC6A62, Chip R38388 |
GSM259126 |
Normal, No cancer, Sample 7NUSVNTN, Chip R38389 |
GSM259127 |
Normal, No cancer, Sample AR9A7NL4, Chip R38390 |
GSM259128 |
Duke B, Cancer, Sample EIBU9AM5, Chip R38391 |
GSM259129 |
Duke A, Cancer, Sample C110, Chip R38392 |
GSM259130 |
Duke B, Cancer, Sample IHDNLAKU, Chip R38393 |
GSM259131 |
Duke B, Cancer, Sample S6TRKAX6, Chip R38394 |
GSM259132 |
Duke B, Cancer, Sample QLKH5A5O, Chip R38395 |
GSM259133 |
Normal, No cancer, Sample Normal Colon Control, Chip R38396 |
GSM259134 |
Duke A, Cancer, Sample C113, Chip R38397 |
GSM259135 |
Duke B, Cancer, Sample N8KVIA3S, Chip R38398 |
GSM259136 |
Duke B, Cancer, Sample ARA7PAQE, Chip R38399 |
GSM259137 |
Duke B, Cancer, Sample 5CYDKA5B, Chip R38400 |
GSM259138 |
Duke B, Cancer, Sample C118, Chip R38401 |
GSM259139 |
Duke C, Cancer, Sample 7NUSVAH3, Chip R38402 |
GSM259140 |
Duke C, Cancer, Sample 8Q9TRAEE, Chip R38403 |
GSM259141 |
Duke B, Cancer, Sample LAQA6A8Q, Chip R38404 |
GSM259142 |
Duke B, Cancer, Sample C115, Chip R38405 |
GSM259143 |
Duke C, Cancer, Sample O3PJWAU4, Chip R38406 |
GSM259144 |
Duke D, Cancer, Sample ZWM3AKE, Chip R38407 |
GSM259145 |
Duke C, Cancer, Sample POELPAF3, Chip R38408 |
GSM259146 |
Duke C, Cancer, Sample MILO4AF8, Chip R38409 |
GSM259147 |
Duke B, Cancer, Sample KSH3JALQ, Chip R38410 |
GSM259148 |
Duke C, Cancer, Sample BLUW6AJB, Chip R38411 |
GSM259149 |
Duke C, Cancer, Sample AJOJHAGP, Chip R38412 |
GSM259150 |
Duke B, Cancer, Sample ZYKTYATN, Chip R38413 |
GSM259151 |
Duke C, Cancer, Sample VYAEKAJF, Chip R38414 |
GSM259152 |
Normal, No cancer, Sample 8Q9TRNVU, Chip R38415 |
GSM259153 |
Duke C, Cancer, Sample ZERO1AZP, Chip R38416 |
GSM259154 |
FFPE-Duke B, Cancer, Sample KSH3JALQ, Chip R38417 |
GSM259155 |
FFPE-Duke C, Cancer, Sample BLUW6AJB, Chip R38418 |
GSM259156 |
FFPE-Duke B, Cancer, Sample ZYKTYATN, Chip R38419 |
GSM259157 |
Duke C, Cancer, Sample NLKEIAE3, Chip R38420 |
GSM259158 |
FFPE-Duke C, Cancer, Sample NLKEIAE3, Chip R38421 |
GSM259159 |
Duke B, Cancer, Sample QLKH5A5O, Chip R38422 |
GSM259160 |
Duke B, Cancer, Sample S6TRKAX6, Chip R38423 |
GSM259161 |
Duke B, Cancer, Sample IHDNLAKU, Chip R38424 |
GSM259162 |
Duke A, Cancer, Sample C110, Chip R38425 |
GSM259163 |
Duke B, Cancer, Sample EIBU9AM5, Chip R38426 |
GSM259164 |
Normal, No cancer, Sample AR9A7NL4, Chip R38427 |
GSM259165 |
Normal, No cancer, Sample 7NUSVNTN, Chip R38428 |
GSM259166 |
Duke A, Cancer, Sample 1YRNPABK, Chip R38429 |
GSM259167 |
Normal, No cancer, Sample Normal Colon Control, Chip R38430 |
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Relations |
BioProject |
PRJNA108453 |
Supplementary file |
Size |
Download |
File type/resource |
GSE10259_RAW.tar |
2.8 Mb |
(http)(custom) |
TAR (of TXT) |
GSE10259_Sample_ID_codes_for_miRNA_array.txt |
2.7 Kb |
(ftp)(http) |
TXT |
Processed data included within Sample table |
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