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GEO accession:
Series GSE49053
Query DataSets for GSE49053
Status
Public on Dec 03, 2013
Title
Differentiation defective phenotypes revealed by large scale analyses of human pluripotent stem cells
Organism
Homo sapiens
Experiment type
Expression profiling by array
Non-coding RNA profiling by array
Methylation profiling by array
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
24259714
Submission date
Jul 19, 2013
Last update date
Feb 18, 2019
Contact name
Shinya Yamanaka
E-mail(s)
[email protected]
Phone
81-75-366-7041
Organization name
Center for iPS Cell Research and Applicaton (CiRA), Kyoto University
Street address
53 Kawahara-machi, Shogoin, Sakyo-ku
City
Kyoto
ZIP/Postal code
606-8507
Country
Japan
Platforms (4)
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GPL5175
[HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [transcript (gene) version]
GPL8490
Illumina HumanMethylation27 BeadChip (HumanMethylation27_270596_v.1.2)
GPL10850
Agilent-021827 Human miRNA Microarray (V3) (miRBase release 12.0 miRNA ID version)
GPL14550
Agilent-028004 SurePrint G3 Human GE 8x60K Microarray (Probe Name Version)
Samples (244)
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More...
GSM1040168
KhES1(p30)_undiff_hES
GSM1040169
KhES3(p37)_undiff_hES
GSM1040170
KhES4(p44)_undiff_hES
GSM1040171
KhES5(p47)_undiff_hES
GSM1040172
H1(p49)_undiff_hES
GSM1040173
H9(p40)_undiff_hES
GSM1040174
ES03(p65)_undiff_hES
GSM1040175
ES04(p74)_undiff_hES
GSM1040176
ES06(p43)_undiff_hES
GSM1040177
SA02(p32)_undiff_hES
GSM1040178
201B2(p67)_undiff_hiPS
GSM1040179
201B6(p25)_undiff_hiPS
GSM1040180
201B7(p18)_undiff_hiPS
GSM1040181
253G1(p32)_undiff_hiPS
GSM1040182
253G4(p30)_undiff_hiPS
GSM1040183
TIG103-4f4(p8)_undiff_hiPS
GSM1040184
TIG107-4f1(p18)_undiff_hiPS
GSM1040185
TIG107-3f1(p57)_undiff_hiPS
GSM1040186
TIG108-4f3(p16)_undiff_hiPS
GSM1040187
TIG109-4f1(p20)_undiff_hiPS
GSM1040188
TIG114-4f1(p21)_undiff_hiPS
GSM1040189
TIG118-4f1(p10)_undiff_hiPS
GSM1040190
TIG120-4f1(p16)_undiff_hiPS
GSM1040191
TIG121-4f4(p16)_undiff_hiPS
GSM1040192
1375-4f1(p10)_undiff_hiPS
GSM1040193
1377-4f1(p13)_undiff_hiPS
GSM1040194
1392-4f2(p19)_undiff_hiPS
GSM1040195
1488-4f1(p27)_undiff_hiPS
GSM1040196
1503-4f1(p28)_undiff_hiPS
GSM1040197
1687-4f2(p12)_undiff_hiPS
GSM1040198
DP31-4f1(p13)_undiff_hiPS
GSM1040199
225C7(p14)_undiff_hiPS
GSM1040200
246G1(p15)_undiff_hiPS
GSM1040201
TKCBV4-2(p82)_undiff_hiPS
GSM1040202
TKCBV5-6(p73)_undiff_hiPS
GSM1040203
TKCB7-2(p42)_undiff_hiPS
GSM1040204
404C2(p44)_undiff_hiPS
GSM1040205
409B2(p52)_undiff_hiPS
GSM1040206
414C2(p55)_undiff_hiPS
GSM1040207
451F3(p41)_undiff_hiPS
GSM1040208
454E2(p46)_undiff_hiPS
GSM1040209
585A1(p16)_undiff_hiPS
GSM1040210
585B1(p16)_undiff_hiPS
GSM1040211
604A1(P14)_undiff_hiPS
GSM1040212
604A3(P14)_undiff_hiPS
GSM1040213
604B1(p13)_undiff_hiPS
GSM1040214
606A1(p14)_undiff_hiPS
GSM1040215
606B1(P13)_undiff_hiPS
GSM1040216
610A2(P14)_undiff_hiPS
GSM1040217
610B1(p14)_undiff_hiPS
GSM1040218
622E1(p18)_undiff_hiPS
GSM1040219
622G1(p19)_undiff_hiPS
GSM1040220
703A1(p17)_undiff_hiPS
GSM1040221
703B1(p17)_undiff_hiPS
GSM1040222
665A1(p17)_undiff_hiPS
GSM1040223
665A7(p18)_undiff_hiPS
GSM1040224
711A1(p12)_undiff_hiPS
GSM1040225
711A6(p13)_undiff_hiPS
GSM1040226
711C1(p14)_undiff_hiPS
GSM1040227
NTERA2 cloneD1_hEC
GSM1040228
2102EP4D3_hEC
GSM1040229
HDF-1388_soma
GSM1040230
DP74_soma
GSM1040231
CB-1_soma
GSM1040232
CB-2_soma
GSM1040233
PBMN-1_soma
GSM1040234
PBMN-2_soma
GSM1040235
HepG2_cancer cell line
GSM1040236
MCF7_cancer cell line
GSM1040237
Jurkat_cancer cell line
GSM1040238
KhES1(p30)_undiff_hES
GSM1040239
KhES3(p37)_undiff_hES
GSM1040240
KhES4(p44)_undiff_hES
GSM1040241
KhES5(p47)_undiff_hES
GSM1040242
H1(p49)_undiff_hES
GSM1040243
H9(p40)_undiff_hES
GSM1040244
ES03(p65)_undiff_hES
GSM1040245
ES04(p74)_undiff_hES
GSM1040246
ES06(p43)_undiff_hES
GSM1040247
SA02(p32)_undiff_hES
GSM1040248
201B2(p67)_undiff_hiPS
GSM1040249
201B6(p25)_undiff_hiPS
GSM1040250
201B7(p18)_undiff_hiPS
GSM1040251
253G1(p32)_undiff_hiPS
GSM1040252
253G4(p30)_undiff_hiPS
GSM1040253
TIG103-4f4(p8)_undiff_hiPS
GSM1040254
TIG107-4f1(p18)_undiff_hiPS
GSM1040255
TIG107-3f1(p57)_undiff_hiPS
GSM1040256
TIG108-4f3(p16)_undiff_hiPS
GSM1040257
TIG109-4f1(p20)_undiff_hiPS
GSM1040258
TIG114-4f1(p21)_undiff_hiPS
GSM1040259
TIG118-4f1(p10)_undiff_hiPS
GSM1040260
TIG120-4f1(p16)_undiff_hiPS
GSM1040261
TIG121-4f4(p16)_undiff_hiPS
GSM1040262
1375-4f1(p10)_undiff_hiPS
GSM1040263
1377-4f1(p13)_undiff_hiPS
GSM1040264
1392-4f2(p19)_undiff_hiPS
GSM1040265
1488-4f1(p27)_undiff_hiPS
GSM1040266
1503-4f1(p28)_undiff_hiPS
GSM1040267
1687-4f2(p12)_undiff_hiPS
GSM1040268
DP31-4f1(p13)_undiff_hiPS
GSM1040269
225C7(p14)_undiff_hiPS
GSM1040270
246G1(p15)_undiff_hiPS
GSM1040271
TKCBV4-2(p82)_undiff_hiPS
GSM1040272
TKCBV5-6(p73)_undiff_hiPS
GSM1040273
TKCB7-2(p42)_undiff_hiPS
GSM1040274
404C2(p44)_undiff_hiPS
GSM1040275
409B2(p52)_undiff_hiPS
GSM1040276
414C2(p55)_undiff_hiPS
GSM1040277
451F3(p41)_undiff_hiPS
GSM1040278
454E2(p46)_undiff_hiPS
GSM1040279
585A1(p16)_undiff_hiPS
GSM1040280
585B1(p16)_undiff_hiPS
GSM1040281
604A1(P14)_undiff_hiPS
GSM1040282
604A3(P14)_undiff_hiPS
GSM1040283
604B1(p13)_undiff_hiPS
GSM1040284
606A1(p14)_undiff_hiPS
GSM1040285
606B1(P13)_undiff_hiPS
GSM1040286
610A2(P14)_undiff_hiPS
GSM1040287
610B1(p14)_undiff_hiPS
GSM1040288
622E1(p18)_undiff_hiPS
GSM1040289
622G1(p19)_undiff_hiPS
GSM1040290
703A1(p17)_undiff_hiPS
GSM1040291
703B1(p17)_undiff_hiPS
GSM1040292
665A1(p17)_undiff_hiPS
GSM1040293
665A7(p18)_undiff_hiPS
GSM1040294
711A1(p12)_undiff_hiPS
GSM1040295
711A6(p13)_undiff_hiPS
GSM1040296
711C1(p14)_undiff_hiPS
GSM1040297
NTERA2 cloneD1_hEC
GSM1040298
2102EP4D3_hEC
GSM1040299
HDF-1388_soma
GSM1040300
DP74_soma
GSM1040301
CB-1_soma
GSM1040302
CB-2_soma
GSM1040303
PBMN-1_soma
GSM1040304
PBMN-2_soma
GSM1040305
HepG2_cancer cell line
GSM1040306
MCF7_cancer cell line
GSM1040307
Jurkat_cancer cell line
GSM1040308
KhES1(p30)_undiff_hES
GSM1040309
KhES3(p37)_undiff_hES
GSM1040310
KhES4(p44)_undiff_hES
GSM1040311
KhES5(p47)_undiff_hES
GSM1040312
H1(p49)_undiff_hES
GSM1040313
H9(p40)_undiff_hES
GSM1040314
ES03(p60)_undiff_hES
GSM1040315
ES04(p63)_undiff_hES
GSM1040316
ES06(p41)_undiff_hES
GSM1040317
SA02(p32)_undiff_hES
GSM1040318
201B2(p67)_undiff_hiPS
GSM1040319
201B6(p25)_undiff_hiPS
GSM1040320
201B7(p18)_undiff_hiPS
GSM1040321
253G1(p32)_undiff_hiPS
GSM1040322
253G4(p30)_undiff_hiPS
GSM1040323
TIG103-4f4(p8)_undiff_hiPS
GSM1040324
TIG107-4f1(p21)_undiff_hiPS
GSM1040325
107-3f1(p57)_undiff_hiPS
GSM1040326
TIG108-4f3(p19)_undiff_hiPS
GSM1040327
TIG109-4f1(p21)_undiff_hiPS
GSM1040328
TIG114-4f1(p21)_undiff_hiPS
GSM1040329
TIG118-4f1(p10)_undiff_hiPS
GSM1040330
TIG120-4f1(p21)_undiff_hiPS
GSM1040331
TIG121-4f4(p28)_undiff_hiPS
GSM1040332
1375-4f1(p10)_undiff_hiPS
GSM1040333
1377-4f1(p13)_undiff_hiPS
GSM1040334
1392-4f2(p19)_undiff_hiPS
GSM1040335
1488-4f1(p20)_undiff_hiPS
GSM1040336
1503-4f1(p28)_undiff_hiPS
GSM1040337
1678-4f2(p12)_undiff_hiPS
GSM1040338
DP31-4f1(p10)_undiff_hiPS
GSM1040339
225C7(p14)_undiff_hiPS
GSM1040340
246G1(p15)_undiff_hiPS
GSM1040341
TKCBV4-2(p74)_undiff_hiPS
GSM1040342
TKCBV5-6(p72)_undiff_hiPS
GSM1040343
TKCB7-2(p38)_undiff_hiPS
GSM1040344
404C2(p48)_undiff_hiPS
GSM1040345
409B2(p45)_undiff_hiPS
GSM1040346
414C2(p55)_undiff_hiPS
GSM1040347
451F3(p40)_undiff_hiPS
GSM1040348
454E2(p48)_undiff_hiPS
GSM1040349
585A1(p16)_undiff_hiPS
GSM1040350
585B1(p16)_undiff_hiPS
GSM1040351
604A1(p14)_undiff_hiPS
GSM1040352
604A3(p14)_undiff_hiPS
GSM1040353
604B1(p13)_undiff_hiPS
GSM1040354
606A1(p14)_undiff_hiPS
GSM1040355
606B1(p13)_undiff_hiPS
GSM1040356
610A2(p14)_undiff_hiPS
GSM1040357
610B1(p14)_undiff_hiPS
GSM1040358
622-E1(p18)_undiff_hiPS
GSM1040359
622G1(p19)_undiff_hiPS
GSM1040360
703A1(p17)_undiff_hiPS
GSM1040361
703B1(p17)_undiff_hiPS
GSM1040362
665A1(p16)_undiff_hiPS
GSM1040363
665A7(p16)_undiff_hiPS
GSM1040364
711A1(p12)_undiff_hiPS
GSM1040365
711A6(p13)_undiff_hiPS
GSM1040366
711C1(p14)_undiff_hiPS
GSM1040367
NTERA2cloneD1(p36)_hEC
GSM1040368
2102EP4D3(p28)_hEC
GSM1040369
HDF1388_soma
GSM1040370
DP74(p14)_soma
GSM1040371
CB-1_soma
GSM1040372
CB-2_soma
GSM1040373
PBMN-1_soma
GSM1040374
PBMN-2_soma
GSM1040375
HepG2_cancer cell line
GSM1040376
MCF7_cancer cell line
GSM1040377
Jurkat_cancer cell line
GSM1040378
TKCBV5-6_undiff.hiPS_SFEBq_defective
GSM1040379
TIG108-4f3_undiff.hiPS_SFEBq_defective
GSM1040380
451F3_undiff.hiPS_SFEBq_defective
GSM1040381
201B7_undiff.hiPS_SFEBq_good
GSM1040382
H1_undiff.hES_SFEBq_good
GSM1040383
253G1_undiff.hiPS_SFEBq_good
GSM1040384
HDF-1388_soma
GSM1040385
DP74_soma
GSM1040441
TIG118-4f1(p20)_undiff.hiPS_SFEBq_defective
GSM1040442
TIG108-4f3(p24)_undiff.hiPS_SFEBq_defective
GSM1040443
1503-4f1(p38)_undiff.hiPS_SFEBq_defective
GSM1040444
TIG107-3f1(p31)_undiff.hiPS_SFEBq_defective
GSM1040445
TIG107-4f1(p24)OH_undiff.hiPS_SFEBq_defective
GSM1040446
TIG120-4f1(p23)_undiff.hiPS_SFEBq_intermediate
GSM1040447
KhES1(p26)_undiff.hES_SFEBq_intermediate
GSM1040448
201B2(p79)_undiff.hiPS_SFEBq_good
GSM1040449
H9(p47)_undiff.hES_SFEBq_good
GSM1040450
253G4(p21)_undiff.hiPS_SFEBq_good
GSM1040451
201B7(p22)_undiff.hiPS_SFEBq_good
GSM1040452
KhES3(p61)_undiff.hES_SFEBq_good
GSM1040453
409B2(p48)_undiff.hiPS_SFEBq_good
GSM1040454
H1(p57)OH_undiff.hES_SFEBq_good
GSM1040455
414C2(p54)_undiff.hiPS_SFEBq_good
GSM1040456
253G1(p22)_undiff.hiPS_SFEBq_good
GSM1040457
1375-4f1(p24)_undiff.hiPS_SFEBq_good
GSM1040458
246G1(p23)_undiff.hiPS_SFEBq_good
GSM1040459
TIG114-4f1(p15)_undiff.hiPS_SFEBq_good
GSM1040460
201B6(p17)_undiff.hiPS_SFEBq_good
GSM1110012
KhES4(p49)_undiff.hES_SFEBq_good
GSM1110013
ES04(p90)_undiff.hES_SFEBq_good
GSM1110014
KhES5(p43)_undiff.hES_SFEBq_good
GSM1110015
ES06(p54)_undiff.hES_SFEBq_good
GSM1110016
ES03(p76)_undiff.hES_SFEBq_good
GSM1110017
SA02(p34)_undiff.hES_SFEBq_good
This SuperSeries is composed of the following SubSeries:
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More...
GSE42445
Comparison of gene expression profilings between hESCs and hiPSCs
GSE42446
Comparison of miRNA expression profilings between hESCs and hiPSCs
GSE42448
Comparison of DNA methylation profilings between hESCs and hiPSCs
GSE42449
Exon array analysis for SFEBq differentiation-defective clones and good clones
GSE42452
Comparison of gene expression profilings between SFEBq differentiation-defective clones and good clones
Relations
BioProject
PRJNA212780
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE49053_RAW.tar
550.9 Mb
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TAR (of CEL, TXT)
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