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Platform GPL765 Query DataSets for GPL765
Status Public on Feb 18, 2004
Title MJArray Mus Musculus
Technology type spotted DNA/cDNA
Distribution non-commercial
Organism Mus musculus
 
Description cDNA microarrays based on the Lion Bioscience (Heidelberg, Germany) clone collection Mouse ArrayTag(r) set A and B.
Each microarray contains 43200 features within two seperate subarrays with each 21600 spots and 20188 spots containing gene probes.
The ID is organized like this:
Letter "A" or "B" to distiguish both subarrays from each other, followed by the # sign an a running index for each subarray (1 to 21600).
probe length: 200 - 600 bp;
printed concentration: 200 - 400 ng/µl;
printing buffer: 150 mM sodium phosphate, pH 8.5, 1.5 M betaine;
substrates: Corning GAPS II;
microarray robot: Genemachines Omingrid 100;
Printhead: Telechem;
Pins: Telechem SMP3;
Keywords = Lion ArrayTag
Keywords = 43k chip
Keywords = Forschungszentrum Karlsruhe
 
Web link http://www.fzk.de/microarray
Contributor(s) Bauer M, Hamm AC, Bonaus M, Katzenberger JD, Pankratz MJ
Citation(s) 14762175
Submission date Dec 01, 2003
Last update date Jan 12, 2007
Contact name Michael J. Pankratz
E-mail(s) [email protected]
Phone ++49 +7247 82 6087
Fax ++49 +7247 82 3354
URL http://www.fzk.de/microarray
Organization name Forschungszentrum Karlsruhe
Department Institute of Genetics
Lab Pankratz
Street address P.O. Box 3640
City Karlsruhe
ZIP/Postal code 76021
Country Germany
 
Samples (60) GSM13169, GSM13197, GSM13198, GSM13241, GSM13242, GSM13243 
Series (4)
GSE851 liver, 48h sugar
GSE852 liver, 48h starved
GSE853 liver, 24h starved

Data table header descriptions
ID
GENE gene symbol (if known)
GB_LIST GenBank Accession Number
MY_GENE "yes" = probe for a gene

Data table
ID GENE GB_LIST MY_GENE
A#1 4930458A03 yes
A#2 unknown BE554029, AI480986, AW985940 yes
A#3 Ndufaf1 AW228696, AI448055, C76894 yes
A#4 unknown yes
A#5 1700054C12Rik AA549368, BE628579, AK006778 yes
A#6 unknown yes
A#7 unknown BF148097, BE200450, BE198032 yes
A#8 2410015K21Rik AI449021, BE945427, AI666370 yes
A#9 unknown AV258744, AV275979 yes
A#10 unknown AA244812, W34100, AA544416 yes
A#11 unknown yes
A#12 Strn4 BE946071, BE983170, AW546941 yes
A#13 Mrpl3 AA388518, AW908732, AW822062 yes
A#14 Rassf1 BC002173, NM_019713, AF132851 yes
A#15 BC022645 BF534272, BF715088, BF715087 yes
A#16 Pbp BF021312, BE553997, BE290550 yes
A#17 A930037G23Rik BE995651, AI551737, AI503419 yes
A#18 1810009A16Rik BE986806, AW122255, BE957356 yes
A#19 unknown yes
A#20 Mpi1 BF577659, AK003289, BG065050 yes

Total number of rows: 43200

Table truncated, full table size 1625 Kbytes.






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